Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq13 141 2e-28 >seq13 Length=1076939 Score = 141 bits (156), Expect = 2e-28 Identities = 425/648 (66%), Gaps = 16/648 (2%) Strand=Plus/Plus Query 193554 ATTGATCATATCTATGAGAAGATCACTCTTCATTATGGAGATCTAACTGATCCT-GTAAA 193612 |||||||| || | || ||| | | | | |||||||||||| || |||| | |||| Sbjct 508195 ATTGATCACATATTCGATAAGTTAATTTTACATTATGGAGATTTACTTGATAGTAGTAA- 508253 Query 193613 TGTTATGGGTGTCATTA----GGGCAGTTGAACCTGCTGAGATCTATAATCTTGGTGCTC 193668 ||| || |||||| | | | | ||| ||| || ||||| | | ||| | Sbjct 508254 ---TATATGT-TCATTAATATGTGAAATAAGACCGAATGAAATATATAACTTAGCTGCGC 508309 Query 193669 AAAGTCATGTTAAAGTTTCCTTTGAGATGCCAGAGTATACTTCTAATGTTGATGCTTTAG 193728 |||||||||| ||||| ||||| ||||| |||||||| | | | |||||||| Sbjct 508310 AAAGTCATGTAAAAGTAAGTTTTGAAATGCCTGAGTATACAACAGAAGCAACTGCTTTAG 508369 Query 193729 GAACTCTTAGAATACTTGAAGCAGTTCGTATGTTGGGAATGGAGAAAGATGTTCGCATCT 193788 | || | |||||| | |||| | | | || | || | ||| || || | | Sbjct 508370 GTACATTAAGAATATTAGAAGGAATAAGAATATC---AAAAGTTAAAAATATTAAATTTT 508426 Query 193789 ATCAGGCATCTACCAGCGAACTGTATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCA 193848 || | ||||| || ||| | | ||| |||| | | || | | |||| | Sbjct 508427 ATAATGCATCAACATCTGAATTATTTGGAAAAGTTCAATGTTCTATTCAAAATGAAAATA 508486 Query 193849 CACCATTTCATCCACGCTCTCCTTATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCA 193908 |||||||| ||||| || ||||||| ||||||| || |||| ||| || | | Sbjct 508487 CACCATTTTATCCAGTATCCCCTTATGCCATAGCAAAATTATATGCACATTATATTACAA 508546 Query 193909 AGAATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAAT 193968 |||||| | || ||||| | || | ||||||| | || ||||| ||| Sbjct 508547 TAAATTATAGAGAATCATACAATATGTTTTGTATTAATGGTATTTTATTTAATCATGAAA 508606 Query 193969 CTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCT 194028 |||||||||||| || || ||||| || | || ||||| |||| | | || || Sbjct 508607 GTCCAAGAAGAGGAGAAACGTTTGTTACAAGAAAAATTACTAGAGGTATTGCAAAAATTC 508666 Query 194029 CTGTTGGATTACAGAAGATTCTTTATCTT-GGTAATCTTAATGCTAAGAGGGATTGGGGA 194087 |||| | || || | ||||||| |||||| | || | | || ||||||||| Sbjct 508667 AAAAAAAATTAGA-AACATCCATTATCTTAGGTAATATAGATACATATAGAGATTGGGGA 508725 Query 194088 CACGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGAT 194147 || || ||||||||||| | || |||| | ||||||||||| |||| | |||||| Sbjct 508726 CATGCTAAGGATTATGTATATGCTATGTATCTTATGTTGCAACAAAATGAGGCAGATGAT 508785 Query 194148 TATGTGATTGCTACAGGTGAACAGTATTCTGTTAGAG-ACTTTGTGAA 194194 | ||| ||| | | |||||| ||||||| |||| | |||||||| Sbjct 508786 TTTGTTATTTGTTCGAATGAACAACATTCTGTCAGAGAATTTTGTGAA 508833 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807547356620120