Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq5 84.2 2e-11 >seq5 Length=2641308 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085 || || |||| || || ||||||||||| || ||||| | ||| | || ||| Sbjct 2485483 ACCAAGTGTAAAGTAGATTCCTTTTGAATATTATAATCTGATAAGGTCCTTCCATCTTCT 2485542 Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145 | || || || || | ||||| | || || || ||||| ||||||||||| || || Sbjct 2485543 AATTGTTTTCCAGCAAATATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATC-TTG 2485601 Query 131146 ATTTTCTG-CTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTT 131204 | ||| || ||| | | ||| | ||||| | | ||| | || | ||||| |||||| Sbjct 2485602 AATTTTTGCCTTAACATTCTCAATCGTATCAGATGGCTCAACATCAAGGGTAATGGTTTT 2485661 Query 131205 ACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || |||| |||||||| ||||| ||||| Sbjct 2485662 TCCAGTTAATGTTTTTACAAAAATTTGCAT 2485691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472008215575680