Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq5 95.1 2e-14 seq12 86.0 1e-11 >seq5 Length=2641308 Score = 95.1 bits (104), Expect = 2e-14 Identities = 62/67 (93%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 142055 CTCTGTGGCGCAAT-GGACAGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCC 142113 |||||||||||||| ||| |||||||||||||||||||||||||| ||||||||||| | Sbjct 1511401 CTCTGTGGCGCAATTGGATAGCGCGTTGGACTTCTAATCCAAAGGCTGCGGGTTCGAATC 1511460 Query 142114 CCGCCAG 142120 ||||||| Sbjct 1511461 CCGCCAG 1511467 >seq12 Length=1150678 Score = 86.0 bits (94), Expect = 1e-11 Identities = 53/57 (93%), Gaps = 0/57 (0%) Strand=Plus/Plus Query 142510 TTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCC 142566 ||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||| Sbjct 241275 TTAGCTCAGTCGGTAGAGCGCCAGACTCTTAATCTGGTGGTCAGGGGTTCGAGCCCC 241331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027826567563457