Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq13 91.5 3e-13 >seq13 Length=1076939 Score = 91.5 bits (100), Expect = 3e-13 Identities = 239/357 (67%), Gaps = 6/357 (2%) Strand=Plus/Plus Query 68418 TCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACTCCGTTTTATCCT 68477 || || || | ||||||||| ||| | ||| | |||||||| || |||||||| Sbjct 508441 TCTGAATTATTTGGAAAAGTTCAATGTTCTATTCAAAATGAAAATACACCATTTTATCCA 508500 Query 68478 CGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGTAAAAATTACCGTGAG 68537 | |||||| | | ||||| || || || ||| || | |||||| | || Sbjct 508501 GTATCCCCTTATGCCATAGCAAAATTATATGCACATTATATTACAATAAATTATAGAGAA 508560 Query 68538 TCGTATAACATGTAT-GTATGCAACTCGATTTGTTTCAATCACGAGAGTCCCAACAGAGG 68596 || || || |||| | |||| || |||| || ||||| || ||||| | ||||| Sbjct 508561 TCATACAATATGTTTTGTATT-AATGGTATTTTATTTAATCATGAAAGTCCAAGAAGAGG 508619 Query 68597 CCATCAGTTCGTGACTCGTAAAATCACGA-AGGTGGTCGCGAATATTTTCAATGGTGTCG 68655 | ||| || || | ||||| || | |||| | || || ||| || | | Sbjct 508620 AGAAACGTTTGTTACAAGAAAAATTACTAGAGGTATT-GCAAAAATTCAAAAAAAATTAG 508678 Query 68656 AAAAATGCATGTATCTC-GGTAATATAGATGCCAAAAGAGATTGGGGATATGCGAAGGAT 68714 ||| || ||| ||||| |||||||||||| | | |||||||||||| |||| |||||| Sbjct 508679 AAACATCCAT-TATCTTAGGTAATATAGATACATATAGAGATTGGGGACATGCTAAGGAT 508737 Query 68715 TACGTAGAAGCAATGTGGTTGATGCTGCAACAAGATACTCCGGATGACTATGTGATT 68771 || ||| | || |||| | ||| |||||||| || | ||||| | ||| ||| Sbjct 508738 TATGTATATGCTATGTATCTTATGTTGCAACAAAATGAGGCAGATGATTTTGTTATT 508794 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102869020484950