Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq9 93.3 1e-13 >seq9 Length=827030 Score = 93.3 bits (102), Expect = 1e-13 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Plus Query 133942 TGCATGGAATGTTGGTGAACTAGATAAAATGACTTTGCCACCATGTCATTGCTTTAGTCA 134001 |||||||||||| || || || ||||| | || || || |||||| || |||| Sbjct 500770 TGCATGGAATGTAAAAGATCTTGACCAAATGGCATTACCTCCTTGTCATATTTTATGTCA 500829 Query 134002 ATTCTTCGTAAATGACGGTAAGTTATCATGTATTCTATATCAACGTAGCTGTGATCTATT 134061 || | || || || || |||||||||||| | |||||| | |||||| || Sbjct 500830 GTTTTATGTTTTCGATGGGAAATTATCATGTATTATGTATCAAAGATCATGTGATTTAGG 500889 Query 134062 CTTAGGAGTACCATTCAACATTGCTTCATATTCATTACTAACTCATATGTTAGCACAAGT 134121 |||||||||| || || |||||||| ||||| | | ||||||||| | |||||||| Sbjct 500890 GCTAGGAGTACCTTTTAATATTGCTTCTTATTCTATTTTTACTCATATGATTGCACAAGT 500949 Query 134122 TTGT 134125 ||| Sbjct 500950 CTGT 500953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147578975378946