Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq4 114 1e-20 >seq4 Length=1968205 Score = 114 bits (126), Expect = 1e-20 Identities = 142/191 (74%), Gaps = 4/191 (2%) Strand=Plus/Minus Query 29577 CACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATC 29636 ||| || || | || ||||| ||||||||||||||||| | | || | ||| || Sbjct 458813 CACTAAGTGTAATGTAGATTCCTTTTGAATGTTATAATCTGATAAAGTTCTTCCATCTTC 458754 Query 29637 GAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTG 29696 | |||||| || ||| |||| |||||||| || || || ||||| || ||||| ||||| Sbjct 458753 TAATTGTTTTCCTGCAAATATTAATCTTTGTTGGTCAGGTGGAATTCCTTCTTTATCTTG 458694 Query 29697 TAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTT 29755 |||||||| || ||| | || | |||||||| | || || ||||| |||||||||| Sbjct 458693 -AATTTTTGCCTTAACATTCTCAATGGTGTCAGATGGCTCGACGTCAAGGGTTATAGTTT 458635 Query 29756 TGCCAGTTAAG 29766 | || ||||| Sbjct 458634 TTCC--TTAAG 458626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385215552094557