Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_023681.1 Length=152710 Score E Sequences producing significant alignments: (Bits) Value seq5 86.0 6e-12 >seq5 Length=2641308 Score = 86.0 bits (94), Expect = 6e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 137215 GTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTCGAGTCTTCGAGTTGTTTACCA 137274 |||||||| ||||| || || ||||| | || || ||||| | |||||| ||| Sbjct 2485495 GTAGATTCCTTTTGAATATTATAATCTGATAAGGTCCTTCCATCTTCTAATTGTTTTCCA 2485554 Query 137275 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTAATTTTTTGTTTT 137334 ||| | || | | ||| ||||| ||||| || |||||||| || ||||||| || Sbjct 2485555 GCAAATATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTGCCTTA 2485614 Query 137335 AGCTGTTCCACCGTGTCTGTGGGTTCTACTTCAACAGTCACCGTCTTGCCGGTCAATGTT 137394 | | || | ||| || | || || || |||| || | || || || || |||||| Sbjct 2485615 ACATTCTCAATCGTATCAGATGGCTCAACATCAAGGGTAATGGTTTTTCCAGTTAATGTT 2485674 Query 137395 TTTACGAATATTTGCAT 137411 ||||| || |||||||| Sbjct 2485675 TTTACAAAAATTTGCAT 2485691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 488539255016400