Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20reichenowi_20[genbank_20GCA_5F001601855.1_202016-04-08] 777 sequences; 20,501,737 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq4 95.1 3e-14 seq5 84.2 5e-11 >seq4 Length=1968205 Score = 95.1 bits (104), Expect = 3e-14 Identities = 135/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 206196 AGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCAGTAAAGCAAAA 206255 ||||||||| || || | || || || |||||||| | || || ||| ||| Sbjct 458630 AGGAAAAACTATAACCCTTGACGTCGAGCCATCTGACACCATTGAGAATGTTAAGGCAAA 458689 Query 206256 GATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTCGCCGGAAAGCA 206315 |||||||| |||||||||||| || ||| |||||| | || || || ||||| || Sbjct 458690 AATTCAAGATAAAGAAGGAATTCCACCTGACCAACAAAGATTAATATTTGCAGGAAAACA 458749 Query 206316 GTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCTACTCTTCACCT 206375 || ||||||||||| ||||| | ||||| ||| | || || || ||||| | ||| | Sbjct 458750 ATTAGAAGATGGAAGAACTTTATCAGATTATAACATTCAAAAGGAATCTACATTACACTT 458809 Query 206376 TGTTTTGAGA 206385 || || ||| Sbjct 458810 AGTGTTAAGA 458819 >seq5 Length=2641308 Score = 84.2 bits (92), Expect = 5e-11 Identities = 132/189 (70%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || |||||||| || || | || || || ||||| || | || Sbjct 2485676 AAAACATTAACTGGAAAAACCATTACCCTTGATGTTGAGCCATCTGATACGATTGAGAAT 2485617 Query 206245 GTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTTC 206304 || ||| ||| |||||||| |||||||||||| || || |||||| | || || Sbjct 2485616 GTTAAGGCAAAAATTCAAGATAAAGAAGGAATTCCTCCTGATCAACAAAGATTAATATTT 2485557 Query 206305 GCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTCT 206364 || ||||| || || |||||||||||||| || | ||||| || | || || || ||| Sbjct 2485556 GCTGGAAAACAATTAGAAGATGGAAGGACCTTATCAGATTATAATATTCAAAAGGAATCT 2485497 Query 206365 ACTCTTCAC 206373 ||| | ||| Sbjct 2485496 ACTTTACAC 2485488 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181809034604617