Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20petteri_20[genbank_20GCA_5F000524515.1_202014 -01-31] 66 sequences; 18,931,523 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq9 89.7 5e-13 >seq9 Length=1049758 Score = 89.7 bits (98), Expect = 5e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 138403 AAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCC 138462 ||||||||||||| | | || || ||||||||||| || || | || || ||| Sbjct 615387 AAAACTAAATGTAAGGTCGATTCTTTTTGAATGTTATAATCAGATAGTGTTCGGCCGTCT 615446 Query 138463 TCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCG 138522 || | |||||| |||| | |||| | ||||| || ||||| || |||||||| || Sbjct 615447 TCCAATTGTTTTCCGGCGAAAATTAATCTTTGTTGATCAGGAGGAATTCCTTCTTTATCT 615506 Query 138523 GTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTT 138582 |||||| ||| | | ||| | ||| || | | || || || | || | ||| Sbjct 615507 TGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGTTCAACATCAAGAGTGATTGTT 615566 Query 138583 TTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || ||||| | |||||||||||| || ||||| Sbjct 615567 TTTCCAGTTAAAGTTTTTACAAAGATTTGCAT 615598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496261990583520