Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20petteri_20[genbank_20GCA_5F000524515.1_202014 -01-31] 66 sequences; 18,931,523 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq11 426 2e-114 seq6 217 2e-51 seq9 188 9e-43 seq2 179 5e-40 seq4 102 1e-16 seq1 98.7 1e-15 seq12 93.3 5e-14 >seq11 Length=775211 Score = 426 bits (472), Expect = 2e-114 Identities = 1100/1653 (67%), Gaps = 42/1653 (3%) Strand=Plus/Minus Query 6517 ATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC-CTTTTTCGCGTACTTT--TCATC 6573 ||| || |||||||| |||| || | || || | |||||| || ||| ||||| Sbjct 389816 ATAGCAATAGTTTTCAAGACTGTTTCTTGCTTCAATTCTTTTTT---TATTTTCTTCATC 389760 Query 6574 TTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCT 6633 ||| ||||||| ||||| ||||| | ||||| | ||||| ||||| |||||||| Sbjct 389759 TTCTGCTTTATATTTTTCAGCATCATTAACCATTCTATCAATTTCTTCAGGAGATAATCT 389700 Query 6634 CCCCTTATCATTCGTAATCGTAATCT--TTTCGGATTTACCCGAGGCCTTATCTTCAGCA 6691 || || ||||| ||||| || || | ||| | |||||| | || || |||| Sbjct 389699 ACCTTTGTCATTAGTAATTGTGATATGATTTTG--TTTACCAGTACTTTTTTCAACAGCT 389642 Query 6692 CTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCC 6751 | ||||| || |||||||||||||| | ||| || | || | |||||||||| | Sbjct 389641 GTGACATTTAAGATACCATTTGCATCGATATCAAAGGTAACTTCAATTTGTGGTACTTTC 389582 Query 6752 CTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC 6811 || || || | ||||||||| ||||| |||| |||| | ||| | ||||| | | Sbjct 389581 CTAGGAGCAGGTGGAATACCATCTAAATGAAATTTACCTAATAAGTTATTATCTTTTG-- 389524 Query 6812 TT----CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867 || || | ||| |||||||| |||| ||| || | ||||||||||| Sbjct 389523 TTAAAGCT--CTTTCTCCTTCATATACTTGTATTAAGACACCTGGTTGATTATCAGCATA 389466 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 || | |||||||| ||| |||| |||||| || |||||||| ||| | || Sbjct 389465 GGTAGTAAAGATTTGACTTTTTTTAGCTGGAATTGTTGTATTTCTTTCAATTAATTTTGT 389406 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||||| ||| || |||||| | ||| | ||| | | || || || | ||| | Sbjct 389405 CATAACACCTCCTGCAGTTTCTAATCCTAAAGATAAGGAACAGACATCTAATAATAATAA 389346 Query 6988 GTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046 ||||| || | ||| | | | |||| | ||| ||||| ||||| || | || || | Sbjct 389345 ATCTTGTACTGCATTGGATTGAT-CACCTGATAAAATGGCAGCTTGAACAGCAGCACCAT 389287 Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTT--ATTCAGTTCTTTACCGTTAAAATAATC 7104 | || || || ||||| || || || | | | || | |||||| || ||||| | || Sbjct 389286 AAGCAACAGCTTCATCAGGATTTATTGATCTGCATGC--TTCTTTTCCATTAAAGAATTC 389229 Query 7105 CGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT 7164 || | | ||||||||| || |||| ||| |||||||| || || || | ||||| Sbjct 389228 TTTTATTAATGTTTGAATTTTTGGAATTCTTGTAGATCCACCAACTAAGACAACTTCATG 389169 Query 7165 CACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGT-TCCATACATT 7223 || || ||| || ||| | | ||| | |||||| || ||| | || || Sbjct 389168 GACACTCTTTTTGTCCATCATGGCATCTTTTAAAACTTTTTCAACTGGTATTAATGTATC 389109 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 | | || |||| ||||| | ||| ||||| | || | ||| | | | ||| Sbjct 389108 T-CTAAAATAGTCAATACATAATTCTTCAAATCTAGCTCTACTAACTGTTACACTATAAT 389050 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343 ||| || ||| | | ||||| |||||||| || | ||| | | |||||||| || | Sbjct 389049 CAATACCTTCGAAAAGGGAATCGATTTCAATAGTGGCTTGAGTTGAAGAAGATAATGTAC 388990 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 | ||||| | ||||| |||| ||| | | | || | || || | || Sbjct 388989 GTTTTGCTCTTTCACATTGTGTTCTTAATCTTCTTAAAGCTCTACTATTTTTTGATAAAT 388930 Query 7404 CTTT--CT-TATGTTTACGTTTAAACTCTTCAG---AGAAGTGT-CGAAGGAGTCTCGAA 7456 | || || ||| ||| | |||||| |||||| | |||| | | || || | Sbjct 388929 CCTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAGTTTACTAAACGGTT----A 388874 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || |||||||||||||| || || ||||| || || || || || |||||||| ||||| Sbjct 388873 TCAAAATCTTCACCACCTAAATGGGTATCTCCTGCTGTGGCCTTAACTTCAAATATACCA 388814 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 ||||||| | | || ||||||||||| |||||||| || | || || || | | Sbjct 388813 TCTTCAATAGTAAGTAATGAAACATCAAAGGTACCACCTCCTAAATCGAAGATTAAAATA 388754 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 || | || | | | || |||| | ||| || || ||||| || || || |||||| Sbjct 388753 TTTTTTTCTCCCTTTCCTTTTTTATGTAAACCATATGCAATAGCTGCTGCAGTAGGTTCA 388694 Query 7637 TTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGT 7696 |||||||| | | | || | || ||||| || | ||||| || || ||||||| | Sbjct 388693 TTAATAATTCTCATAACATTTAATCCTGCAATTGTACCAGCATCCTTTGTTGCTTGTCTT 388634 Query 7697 TGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGA 7756 |||||||||||||| || || || || || | || || | ||| || || | | Sbjct 388633 TGCGAATCGTTAAAATATGCAGGTACTGTAATAACTGCATTTTTGATAGATTTTCCCAAA 388574 Query 7757 TACGATTCCGCGATATCTTTCA-TTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGC 7815 | | ||| || | ||||||| |||| |||| |||||| || ||||| ||||||| Sbjct 388573 AAGGCTTCTGCATTTTCTTTCATTTTTTGTAA-AACCATAGAAGAAATTTCTTCAGGGTG 388515 Query 7816 AAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGG 7875 ||| ||| ||||||| | | || ||||||||||||| ||||| || || ||| | Sbjct 388514 AAATAATTTTTTTTCACCTTGATAAACAACTTCAATCATAGGTTTTTCTTCAATACCTGA 388455 Query 7876 GATAACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCT 7935 | || || | | ||| | ||||||||| ||| || || | ||| || || Sbjct 388454 TTTGACTGTAAATGGCCAGTGTTTCATATCACTTTGTACAGAAGATTCTGTAAATTTCCT 388395 Query 7936 TCCGATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTT 7995 ||| || | | |||||||| || |||||||||| |||||| | || |||||| || Sbjct 388394 TCCAATTAATCTTTTTGCATCGAAGACTGTGTTTTCTGGGTTCCTTGCAACTTGGTTTTT 388335 Query 7996 CGCCGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 || || || || || | | ||| || || || || || || || || || || || Sbjct 388334 AGCTGCATCACCAATTAATCTTTCTGTA---TCAGTGAAAGCAACATAGGAGGGAGTTGT 388278 Query 8056 TCGATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || ||||||||||| ||||| || || || || ||| ||| || || || || Sbjct 388277 TCTGTTACCTTGGTCGTTGGCAATGATATCAACATTTTCATTTCTCCATACACCAACACA 388218 Query 8116 CGAATACGTTGTTCCTAAATCAATACCGATTGC 8148 || || || || |||||||| ||||| || || Sbjct 388217 GGAGTAAGTGGTACCTAAATCGATACCTATAGC 388185 >seq6 Length=1276811 Score = 217 bits (240), Expect = 2e-51 Identities = 827/1282 (65%), Gaps = 46/1282 (4%) Strand=Plus/Minus Query 6553 CTTTTTCGCGTAC-TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTT 6611 ||||||| | || |||| ||||||||| | | ||||| ||||| | | ||| |||| Sbjct 627382 CTTTTTCTCTTAAATTTTTATCTTCATCAGCAAATTTTTCAGCATCGTTAATCATTTTTT 627323 Query 6612 CAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTAC 6671 | || | |||||| |||||||| || || ||||| ||||| || || || | ||| | Sbjct 627322 CTATTTGTTCTTTTGATAATCTACCTTTGTCATTAGTAATAGTTATACCTTTGCTTTTTC 627263 Query 6672 CCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTA 6731 | | | |||||||| || |||| |||||||||||| ||| ||| || | | Sbjct 627262 CTGTTCCTTTATCTTCTGCTTCAACATGTAAAATACCATTTTTATCGACAGTAAATGTAA 627203 Query 6732 CATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAA 6791 | | |||| ||| ||| || |||| | ||||||||| | ||| |||||| |||| | Sbjct 627202 CCTCGATTTTAGGTACACCTCTTTGTGCAGGTGGAATACCAGATAATTCAAATTTACCTA 627143 Query 6792 GTAAACTGTTATCCGTCGCCTTCTT--ACGTTCACCTTCATAGACTTTAATTGTCACCGC 6849 |||| |||||| | | || | | ||| |||||| | |||| |||| || || Sbjct 627142 ATAAATGGTTATCTTTAG--TTAATGCTCTTTCTCCTTCAAAAACTTGAATTAAAACAGC 627085 Query 6850 AGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATT 6909 |||||||||||||| ||||| ||| ||||| ||| || | ||| || ||||| Sbjct 627084 TGGTTGATTATCTTGATAAGTTGAAAAGGTTTGTGATTTTTTTGTTGGGATAACTGTATT 627025 Query 6910 TCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGT 6969 ||| ||| | | |||||||||||||| | |||||| | || | || | || || Sbjct 627024 TCTTTTAATTAATTGAGTCATAATACCACCAACAGTTTCAATACCTAAAGTTAATGGAGT 626965 Query 6970 CACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGC 7029 || || || | || | ||||| | ||| |||| || | || | || Sbjct 626964 AACATCTAACAATACAACATCTTGTA---ATT------CTTCTCCTAAAATAATACCAGC 626914 Query 7030 TTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTT 7089 ||| | | || || ||||| || || ||||| |||||||| | |||| ||||||| Sbjct 626913 TTGAATAGCAGCACCATATGCTACGGCTTCATCTGGGTTAATACCTCTATTTGGTTCTTT 626854 Query 7090 ACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGAC 7149 ||| || ||| | || | |||||||| ||||| || || || || || || || || Sbjct 626853 ACCATTGAAAAAGTCTTTAATAATTTGTTGGATTTTAGGTATACGAGTTGAACCTCCTAC 626794 Query 7150 CAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTCGA 7208 ||||| ||||||| | ||| ||| || |||| || || || | ||||| | Sbjct 626793 TAAAACAATTTCATCGATTTTGCTTTTTTCATATTTTGCATCATCTAA-TACTTTTTTAA 626735 Query 7209 CAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCAC-GGGTA 7267 ||||||| | | || | || || || | | ||| || || || | | || Sbjct 626734 CAGGTTCTAAAGTTTCTCTAAATAAATCATCATTTAATTCTTCGAATTTGGCTCTTGTTA 626675 Query 7268 ATGGATGTATAGAAATCAACGCCGTC--GTATAACGAATCAATTTCAAT---GGTTGTTT 7322 ||| | | | || | | || || |||| | ||||||||||| ||||| | Sbjct 626674 ATGTTTCT-GAAAAGTTATGTCCTTCAACTATATC--TTCAATTTCAATTTGGGTTGAGT 626618 Query 7323 GTGCCGTCGAA--GATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAG 7380 | | || ||||| ||| ||||| ||| | ||| ||| ||| Sbjct 626617 GAAC-----AACTGATAAGTTTCTTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAAT 626563 Query 7381 GGCACGCGGGTTACCGGA---AATATCTTTCTTATGTTTACGTTTAAAC-TCTTCAGAGA 7436 || | ||| | || || |||| | |||| ||| ||||||| | || | | | Sbjct 626562 AGCTC---TTTTATCTGATCTAAGATCTATATTATTTTTTTTTTTAAACATTTTTATA-A 626507 Query 7437 AGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCG 7496 ||| | | ||| ||| ||||||||||| || ||||| |||| || || || | Sbjct 626506 AGTAATCCATAACTCTTTGATCAAAATCTTCACCTCCTAAGTGAGTATTACCTGCTGTTG 626447 Query 7497 CTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCAC 7556 | | ||||||||| | ||| || || ||| | ||||||||||| |||||||| | Sbjct 626446 CATAGACTTCAAATACACCATTATCTATAACTAAAATAGAAACATCAAAAGTACCACCTC 626387 Query 7557 CCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGA 7616 | | || | | | | | || |||| || ||||| | ||| || || | Sbjct 626386 CTAAATCGTATACTAAAATACTTGT------TTCTTCTTTTTTATCTAAACCATAAGCTA 626333 Query 7617 TAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCG 7676 ||| || || || ||||| ||||||||||| | || | |||||||| | | | Sbjct 626332 AAGCAGCAGCGGTGGGTTCGTTAATAATACGTACTATATTTAATCCAGCAATTGCACCAG 626273 Query 7677 CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGT 7736 ||||||| || ||||||| ||| | ||| || || || || || || || || || || | Sbjct 626272 CATCTTTTGTAGCTTGTCTTTGTGCATCATTGAAATATGCAGGTACAGTAACAACAGCAT 626213 Query 7737 CCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCG 7796 | || || || | | | |||| || || ||||||||||| | |||||| | Sbjct 626212 TTTTTACAGGTTTGCCCAAAAATGATTGGGCAATTTCTTTCATTTTTTCTAAAACCATAG 626153 Query 7797 ATGAAATCTCTTCAGCCGCAAA 7818 ||| | ||||| ||||| Sbjct 626152 CACTAATTTGTTCAGGTGCAAA 626131 >seq9 Length=1049758 Score = 188 bits (208), Expect = 9e-43 Identities = 979/1543 (63%), Gaps = 47/1543 (3%) Strand=Plus/Plus Query 104470 TGGTCTATATACACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCC 104529 ||||| || | ||||| | ||| || |||||||| || || ||||||| | |||||| Sbjct 572465 TGGTCGATGAAAACACCACGATCAGCAGCCATATCAATAATATTTTTTTGTTTGATTTCC 572524 Query 104530 CATACGGTTTTATACAATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGAC 104589 || || |||||||||||||| || | || ||||| ||| |||| | ||||||| Sbjct 572525 CAAACTGTTTTATACAATTCTTTCAAGTCGCTAGGTATTTCACTAATATATTGAACACTT 572584 Query 104590 CCATTTGCCTTCACCATAA---GATCTTTCATTTCCTTCGACCAGAGTCCACGTTCTTTC 104646 ||||| | | || | | | |||||| || | ||| || || ||| || Sbjct 572585 CCATTA---TGGGCAATTAATTGTTGTTTCATATCTTCATCCCAAAGACC----TCTATC 572637 Query 104647 AAA----TCGTTTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCT 104702 ||| || |||| ||||| || || || | |||||||| | ||||| Sbjct 572638 AAAAAGATCTTTTAACAAATGAGGATTGACAACAAAGAATTCACCACTTAAAACACGTCT 572697 Query 104703 CAAATAGATATTGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGT 104762 |||| || || | ||||| ||||| || | || || || |||||||| || || || Sbjct 572698 GTAATAAATGTTACTTGTATATGGTTCAAAGGATTCATTATTTCCTAAAATTTGTGAAGT 572757 Query 104763 GGATGCGGTAGGCATAGGTGCAAGAAGAAGACTATT-CATAGTTCCT---TTCTTAACAA 104818 || || || ||||||||||| | ||||||| ||| | || | | | | |||| Sbjct 572758 TGAAGCTGTTGGCATAGGTGCTAAAAGAAGAGAATTTCTTAATCCATGCATACTTATTTT 572817 Query 104819 GTTTACGCATGGCATTCCAATCG---TATCGACCACTAAACTTTGGGTCTCGATCCCACA 104875 ||| || || |||||| ||| | | | ||||| | || ||||| Sbjct 572818 TTTTTTTAATAA-ATCCCAATCCCAATATTTATTA-TCTACTTTTGC-----ATTCCACA 572870 Query 104876 TATCGAATTGAAGAATACCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGT 104935 |||| ||||| | || ||||| || || || | | | | |||||| || || | Sbjct 572871 TATCAAATTGTAATATTCCTTTGCTTGCTGGACTACCTTGATATGATTCATATGGTCCAT 572930 Query 104936 ACATTTCGGCAAGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATAT 104995 | || || | ||| ||| ||| | | || | || ||||| || ||||| Sbjct 572931 TTACTTGTGCTAACTCAACAGACATTTCTAAAGCAGCATAATACATAGTCTCAAATATTC 572990 Query 104996 CAATGTTGAGTTTTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGT 105055 | || | || | | | ||| || || | ||| |||||| | ||||| | Sbjct 572991 TTCTATTTAATTCTTTAGCTTCATCAGATTCATATGGATATCTTAAAAGCATAAATGTAT 573050 Query 105056 CAGCGAGACCCTGAACACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGT 105115 | || | || || || || || || || || || || | ||||||| | || | | Sbjct 573051 CTGCTAATCCTTGTACTCCTATTCCAATAGGCCTATGTCTTTTATTTGATCTTTCGGCTT 573110 Query 105116 TTTCGGTTGGGTAAAAGTTTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCG 105175 || |||||||| | ||| | ||||||| || | ||| || | |||| ||||| | Sbjct 573111 CTTTAATTGGGTAATAATTTCTTTCAATAATTTTATCTAAATTTCTAGTAATAATTTTAG 573170 Query 105176 TAACACGATGTAACTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTA 105235 ||| | || ||| | || | ||||| || || || || |||||| |||| || Sbjct 573171 TAATATCATATAATTTTTTAAAATTAAATTCTTTTTTTTCTCTATCAACAAATTTACATA 573230 Query 105236 ACGCGATTGATGCGAGATTACATACGGCGGTTTCTTCC--TTATCCGTAAACTCCAGAAT 105293 | || ||||| || |||||||| || || ||| || | || ||| | || | ||| Sbjct 573231 ATGCAATTGAAGCTAGATTACAAACAGCTACTTCATCAGGTGAT--GTATATTCAACAAT 573288 Query 105294 TTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATT 105353 ||| ||| ||||| ||||||| || || | | ||| || || || || ||| Sbjct 573289 TTCACAACATAAATTACTACATTTAATTGTTCCTAAATTTTTTTGATTAGATTTAGAATT 573348 Query 105354 ACACGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATT-TAATAATTG 105412 || || ||||| || | ||||||||| || |||||| |||| || ||||| | | Sbjct 573349 GCATGCATCTTTATATAACATATATGGTACACCAGTTTCAATTTGACTTTGTAATA-TAG 573407 Query 105413 CTTTCCAAATCTCCGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCT 105472 | ||| | || || | || ||| || | | | ||| | ||||||||| Sbjct 573408 CAAACCATAAATCTTGTGCAAGAACTGTTTTTTTTCCCAAATTTTCTGCTTCGTATTTTG 573467 Query 105473 CGTAAAGATCTTCAAACTCTTTACCGTACACGTC--TGAAAGACCCTTTGCCTG-ATCAG 105529 || | | |||||| |||| ||| | || | ||| ||| || | || || Sbjct 573468 TATATAATTTTTCAAATTCTTCACCCCAAGATTCACTTAAA---CCTGGGCATTCATTAG 573524 Query 105530 GACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCC 105589 | || | || | ||| || || | || | |||||| || ||||| || | || Sbjct 573525 GGCACATTAAAGTCCAGTTTTTATTTTCCTTTACTCTTTTCATAAATAAATCAGGTACCC 573584 Query 105590 ACATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTT 105649 | || || |||| | || ||| ||| ||||| | ||| ||||| | | | Sbjct 573585 AAATAGCATAAAATAAATCACGAGCTCTCAATTCTTCTTTACCGTGATTTTTTCTTAAAT 573644 Query 105650 CGAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTAC 105709 | | ||| || | |||||| | |||||||||||| | ||| || |||| ||| || || | Sbjct 573645 CTAAAAATTCAAAAATATCTGAGTGCCATGGTTCAATATATACAGCAAAAGAACCCTTTC 573704 Query 105710 GA----CGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGA 105765 |||| | |||||| ||||||||||| || ||| | |||| |||||||||| Sbjct 573705 TTTTTCCGCCAC-CTTGATCTACATATCTTGCTGTATCATTAAAAACTCTTAACATTGGA 573763 Query 105766 ATAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCG 105825 | | ||||| ||| | ||||| ||||| | ||||| || || | | | | ||| Sbjct 573764 ACTAAACCATTTGATATACCATTAGTTCCTCTAATATAAGAATTTTGACCTCTAATATCT 573823 Query 105826 TGAACGTGTAAC-CCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGT 105884 || || | ||| || ||||| || || ||||| || ||||| | |||| ||| Sbjct 573824 TGTAC-AGCAACACCTATACCTCCTGCTGTTTTACTAATTAATGCACATTGCTTTAATGT 573882 Query 105885 ATCGTAAATACCGTCGATACTATCTTCCTTATTCGCAATCAGGAAACACGATGACATTTG 105944 || | ||||| || || ||| || ||| | | || || || |||||||| Sbjct 573883 TTCAAATATACCTTCTATCGAATCAGATTTCATCGATAATAAAAAGCATGAAGACATTTG 573942 Query 105945 TGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGA 105987 || || ||||| || | ||| || | ||||| || |||||| Sbjct 573943 GGGCCTTGGTGTTCCCGAATTAAATAATGTTGGAGTAGCATGA 573985 >seq2 Length=1775135 Score = 179 bits (198), Expect = 5e-40 Identities = 550/840 (65%), Gaps = 8/840 (1%) Strand=Plus/Plus Query 115062 ATAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCAT 115121 |||||| | || | ||||||||| || || ||||| || | | ||||| ||||| Sbjct 183224 ATAATCTGCAACTCTCTTTTCAAAGAAATTAGTTTTTCCTTGTAAAGATATTAAGTCCAT 183283 Query 115122 AAAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCACTTGTTTTGATAATCG 115181 || ||| |||||||| | | | | ||| ||| | || | ||||||| Sbjct 183284 CCAACTAAATGGATTTTTTGAATGGAAAACTTTGGAACAACCTAAACATTCTAATAATCG 183343 Query 115182 ATCCGCAACATATTCGATATACTCCGACATTTTACCGGAATTCATACCTATGAGACTACA 115241 ||| |||||| ||||||| || | ||||| | |||||||| || || | | ||| Sbjct 183344 ATCAGCAACAAATTCGATGTATTGAGACATAAGTCTTGAATTCATTCCAATTAAATCACA 183403 Query 115242 CGGAAGTGCGTCCGTAATGAATTCTTTTTCGATTGAAACGGCGTCTCTTATAATTTCTTC 115301 || | | || ||| ||| | |||| | | ||| || ||| | | || | | Sbjct 183404 AGGTAAAGATTCACAAATAAATGATCTTTCTACTTCAACTGCTTCTTTAACTATATTCTG 183463 Query 115302 AATTGTATTTTGAGATGGTTTGTTTTTTAACATGTTGAATAATTCAACCGC-AAATTCTT 115360 || | || | | ||| |||| ||||| | | | |||| ||| ||| ||| Sbjct 183464 AACAACCTCTTCTGGTAATTTATTTTCTAACAAGCTATA-AATTAAACAATTAAAATCTG 183522 Query 115361 GGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACC-TGGAAGTAAC 115419 ||| | |||||||| | ||| || | |||||||||||| |||||| || || | | Sbjct 183523 TGTGTAATCCTTCATCCCTACTAATTAATTCATTACTAAATGTTAAACCGTGTAATTTAT 183582 Query 115420 CCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCAACA 115479 | |||||| |||||||| || |||||||| || || || ||||| ||||| ||| Sbjct 183583 TTTG-CTTTTTAAACCAAAATATTGCACAAAAGCTTCCACTAAATAATATTCCTTCGACA 183641 Query 115480 CACGCAAAGGCTAATAAACGTTCAGCAAATGGTCGTTTCTTATCAAACCACTTCATAGCC 115539 || ||| |||| | | ||||||||| | | | | || | ||| || ||| Sbjct 183642 CATGCATTAGCTACAATTCTTTCAGCAAAAGAATTTGTATCATTTATCCATTTAGCTGCC 183701 Query 115540 CATTTCGCCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAATAATTGTTTCTTT 115599 ||| || || ||| || || || ||| ||| || | ||||| | | | | Sbjct 183702 CATAATGCTTTATTTTTTATTGCTGGTATATTTTCAATAGCATGAAATAAATTTAACCTC 183761 Query 115600 TCGCTAGAATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTTCACCGTGTACCATT 115659 || | || || ||||| || || || | | ||| || |||||| ||||| || Sbjct 183762 TCCTTCTCATCCTTAATATAATTATCAATTAATAAACTATATGTTTCAGAGTGTATATTT 183821 Query 115660 TCATTGTGAGATTGATAGGCATAAAATGATCGAGCCTCCGTAAGTTGTATTTCATCTGCA 115719 ||| |||| | | |||||| | ||| || | | ||||| || ||| | Sbjct 183822 TCAACAGCTATTTGAAAAGAATAAAACTTTTTAGCTTCAATTATTTGTACCTC-TCTTAA 183880 Query 115720 AAATT-ATTATTTATATTTTCAAAAACTATACCATCAGAACCAGCaaaaaaaGCTAAAAT 115778 ||||| | || | |||||| || ||||| |||||| | | |||||||| ||||| | Sbjct 183881 AAATTTACTAGCCAAATTTTCTAATACTATTCCATCACTAGCTGCAAAAAATGCTAACAC 183940 Query 115779 ATATTTTATAAAATGTTTTTCATTATCACTTAATTCATTCCAA-TCATCCATATCTTTGG 115837 || ||||||||||||||||||||| || |||||| ||| || || | || ||| | | Sbjct 183941 ATGTTTTATAAAATGTTTTTCATTTACATTTAATT-TTTCAAAGTCTTTCAAATCACTTG 183999 Query 115838 AAAAGTCTATCTCTTCAGCGGTCCAATTTGACATTTGGGCCTTTTTATACAAAGTCCATA 115897 | || ||||| |||||||| |||||| ||| || || |||||||| ||| |||||| Sbjct 184000 ATAAATCTATTTCTTCAGCAGTCCAAAATGAGGCTTCAGCTTTTTTATAAAAATTCCATA 184059 >seq4 Length=1703499 Score = 102 bits (112), Expect = 1e-16 Identities = 191/275 (69%), Gaps = 8/275 (3%) Strand=Plus/Plus Query 11452 CCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAATTCA 11511 |||| ||||| |||||||| ||||| |||||| | ||| || || | ||| | || Sbjct 571623 CCAACAGCATCTATTTCATCAATAAAAATAATAGATGGTGCATGTTTTCTTGCTTGTGCA 571682 Query 11512 AATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGAC--- 11568 |||| || | |||||| || |||| |||||||| | ||||| || || || Sbjct 571683 AATAATTCTCTAACTCTTGATGGTCCTATTCCTACAAATACTTCAATAAA--ATCACTTC 571740 Query 11569 CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTT 11628 | | || | | || ||| |||||| || ||||| || | ||| |||||| || ||| Sbjct 571741 CACTAATATTAAA-AAAGGGAACGTTAGCCTCACCAGCAACAGCTTTTGCTAATAGAGTT 571799 Query 11629 TTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC-GGTACC 11687 || || || || ||| ||| |||||||||||| |||||||||| ||||| ||| Sbjct 571800 TTTCCGGTTCCCGGTGCACCACATAATAATGCACCTTTTGGTATTTTTGCACCTAATACT 571859 Query 11688 AAAGTACTTTTCTGGCGCCTTGAGAAAATCAACAA 11722 | || ||| |||| || | ||||||||||| Sbjct 571860 TGA-TATTTTGCTGGATTTTTCAAAAAATCAACAA 571893 Score = 95.1 bits (104), Expect = 2e-14 Identities = 186/271 (69%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||| || || || |||| || || ||||| || ||||| | ||| Sbjct 1122703 ATCAAAATCTTCTCCTCCTAAAGAGGTATTTCCATTTGTGGCTTTTACCTCAAAAACACC 1122644 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||| || | ||| | ||||||||||| ||||| || || | |||| ||| || Sbjct 1122643 TCCTAATATTTCTAAAATTGAAACATCAAATGTACCTCCTCCTAAGTCATAAACAGCTAT 1122584 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || | || |||| |||| | ||| | || | |||||| || |||||||| Sbjct 1122583 GACTTTACCATCA-CTTTTTTCTAA-----ACCAAAAGCTAAAGCCGCTGCAGTTGGTTC 1122530 Query 7636 ATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||||||||| | || ||| | || || ||||| | | || ||||| || ||||| | Sbjct 1122529 ATTAATAATTCTTAAAACA-TCTAGTCCTGCAATTTTACCAGCGTCTTTTGTTGCTTGCC 1122471 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725 ||| ||||| ||||| || || ||||| || Sbjct 1122470 TTTGTGAATCATTAAAATATGCAGGGACAGT 1122440 >seq1 Length=2452783 Score = 98.7 bits (108), Expect = 1e-15 Identities = 256/384 (67%), Gaps = 15/384 (4%) Strand=Plus/Minus Query 22441 AAATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCA---CAA 22497 ||||||||| | || || ||||| || | || ||||| | | ||| | | ||| Sbjct 914073 AAATTTTATAATGCTTCAACATCGGAATTATATGGTAATAATACTCAAAGCCAATGTCAA 914014 Query 22498 AATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATAT 22557 ||||||||||| || ||| | || ||||| |||||| |||| ||||| | || Sbjct 914013 AATGAAAATACTCCATTTAATCCAGTCTCACCTTATGGGATAGCAAAATTATATAGTCAT 913954 Query 22558 TGGGCGACAGTTAATTATAGAGAATCATACGGTATG-TTTGCATGCAATGGTATAATGTT 22616 | ||| |||||||||||| |||| |||| ||||| | ||||||||| | || Sbjct 913953 TATATAACAAAAAATTATAGAGAAGCATATAATATGTTTTGCGT-AAATGGTATATTATT 913895 Query 22617 CAACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGT 22676 || || ||| || ||||| ||||||| || || ||| ||||| ||| ||| | Sbjct 913894 TAATCATGAAAGTCCAAGACGTGGTGAAACATTTGTTACAAAGAAAATTACAAAAGGTAT 913835 Query 22677 CGCTAATATCAGTGCAGGTAAACAAAAATGTTTATACCTT-GGTAACCTAGATGCGAAAC 22735 || || || | | | || | ||| |||| || || || || | ||| | Sbjct 913834 AGCAAAAAT-ATTTAAAAAAATCCAAACTGTTATTATATTAGGAAATATTGATACATTTA 913776 Query 22736 GAGATTGGGGTCATGCACGCGATTACG----TGAAATGTATGTGGAAAATATTACAACAA 22791 ||||||||||||||||| ||||| | || ||| ||| | ||| ||||||||| Sbjct 913775 GAGATTGGGGTCATGCAAAAGATTATGTATATGCAATATATTT----AATGTTACAACAA 913720 Query 22792 GATAAACCGGAAGATTTTGTTATT 22815 | | || | |||||||||||| Sbjct 913719 AAAACTCCTAATGATTTTGTTATT 913696 >seq12 Length=649772 Score = 93.3 bits (102), Expect = 5e-14 Identities = 167/244 (68%), Gaps = 0/244 (0%) Strand=Plus/Minus Query 11438 TACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTT 11497 |||||||||| ||| | ||||| |||||||| ||||| | ||| || ||| || || Sbjct 586137 TACTTCTTTTAGAACCCACTGCATCTATTTCATCAATAAAAACAATGCAAGGTGCATGTT 586078 Query 11498 CACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAA 11557 ||| || || | || | | |||| |||| ||||| || ||||||||||| Sbjct 586077 TTTTTGCGGTTTGGAAAAGCTCTCTTATTCTTCTTGCACCTACACCAACAAACATTTCTT 586018 Query 11558 CGAACGATGACCCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTG 11617 | || ||| || || || |||||||| || | ||| || || ||||| | | Sbjct 586017 CAAATTCTGAACCAGATGCTTGGATAAAAGGCACATTTGCTTCCCCTGCAATAGCCCTAG 585958 Query 11618 CTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAG 11677 | | | |||||| ||||| || |||| ||||| ||||||| ||| | || | ||| | Sbjct 585957 CAATTAATGTTTTTCCTGTTCCAGGTTCACCTGATAATAATATACCTTTGGGCAATTTTG 585898 Query 11678 CACC 11681 |||| Sbjct 585897 CACC 585894 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132276015440