Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20petteri_20[genbank_20GCA_5F000524515.1_202014 -01-31] 66 sequences; 18,931,523 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq9 95.1 9e-15 >seq9 Length=1049758 Score = 95.1 bits (104), Expect = 9e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 48540 CCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGAT 48599 || || ||||| | || || ||||||| || ||||||||||| || ||||||||| Sbjct 615372 CCTCCTCTTAGTCTTAAAACTAAATGTAAGGTCGATTCTTTTTGAATGTTATAATCAGAT 615431 Query 48600 AGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGA 48659 || |||| |||| ||||| || || ||||| || || | || |||||||| | ||| Sbjct 615432 AGTGTTCGGCCGTCTTCCAATTGTTTTCCGGCGAAAATTAATCTTTGTTGATCAGGAGGA 615491 Query 48660 ACGCCCTCCTTGTCGCTAATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACC 48719 | || || || || || || ||| ||| | | | || || | || || Sbjct 615492 ATTCCTTCTTTATCTTGGATTTTAGCTTTAACATTTTCAATGGTATCAGATGGTTCAACA 615551 Query 48720 TCCACCGTAATCGTTTTTCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || | || || |||||||| || |||||||||||||| || ||||| Sbjct 615552 TCAAGAGTGATTGTTTTTCCAGTTAAAGTTTTTACAAAGATTTGCAT 615598 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937293583318