Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20petteri_20[genbank_20GCA_5F000524515.1_202014 -01-31] 66 sequences; 18,931,523 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq11 585 3e-162 seq6 322 6e-83 seq9 208 1e-48 seq3 141 1e-28 seq4 116 5e-21 >seq11 Length=775211 Score = 585 bits (648), Expect = 3e-162 Identities = 1120/1631 (69%), Gaps = 21/1631 (1%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 ||||| |||||||||||||| || |||||||| ||||||||||||||| |||||| | Sbjct 388185 GCTATAGGTATCGATTTAGGTACCACTTACTCCTGTGTTGGTGTATGGAGAAATGAAAAT 388244 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || || || | || |||||||| ||| | |||||||| || || ||||| || || Sbjct 388245 GTTGATATCATTGCCAACGACCAAGGTAACAGAACAACTCCCTCCTATGTTGCTTTCACT 388304 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 |||| ||| | | |||| ||||| || ||||| || || | |||||| || Sbjct 388305 GATACAGAAAGATTAATTGGTGATGCAGCTAAAAACCAAGTTGCAAGGAACCCAGAAAAC 388364 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || ||||| || || || | | ||||| | || ||| | || || ||| Sbjct 388365 ACAGTCTTCGATGCAAAAAGATTAATTGGAAGGAAATTTACAGAATCTTCTGTACAAAGT 388424 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 ||||| || ||||| | | | ||| | ||| | | || || ||||||||| | Sbjct 388425 GATATGAAACACTGGCCATTTACAGTCAAATCAGGTATTGAAGAAAAACCTATGATTGAA 388484 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 |||| | ||| ||||| || ||| |||| || ||||||||||| |||||||| || Sbjct 388485 GTTGTTTATCAAGGTGAAAAAAAATTATTTCACCCTGAAGAAATTTCTTCTATGGTTTTA 388544 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 || ||||| || | ||| ||| | || |||| ||| || | ||| |||||||| | Sbjct 388545 CAAAAAATGAAAGAAAATGCAGAAGCCTTTTTGGGAAAATCTATCAAAAATGCAGTTATT 388604 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || |||||||| || || | ||||| ||| |||| || |||||||| |||| | | ||| Sbjct 388605 ACAGTACCTGCATATTTTAACGATTCGCAAAGACAAGCAACAAAGGATGCTGGTACAATT 388664 Query 195779 GCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGT 195838 || || |||| | | |||||||| |||||||| || || || || ||||| |||||| Sbjct 388665 GCAGGATTAAATGTTATGAGAATTATTAATGAACCTACTGCAGCAGCTATTGCATATGGT 388724 Query 195839 CTGGACAAGAACAAGG--ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTA 195896 | ||| || |||| | | ||| |||||| | || ||||| ||| | || ||||||| Sbjct 388725 TT--ACATAAAAAAGGAAAGGGAGAAAAAAATATTTTAATCTTCGATTTAGGAGGTGGTA 388782 Query 195897 CGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTG 195956 | |||||||| ||| | || | |||||||| ||||||||| ||||| ||||| || || | Sbjct 388783 CCTTTGATGTTTCATTACTTACTATTGAAGATGGTATATTTGAAGTTAAGGCCACAGCAG 388842 Query 195957 GTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT-CTGAT 196015 | ||||| ||| |||||||||||||||| ||| ||| || | ||||| ||| Sbjct 388843 GAGATACCCATTTAGGTGGTGAAGATTTTGATAACCGT-TTAGTAAACTTTTGTGTTGAA 388901 Query 196016 GAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCGG 196072 || || |||| |||| || || ||| | || |||| ||| ||| | | | Sbjct 388902 GATTTTAAAAGAAAAAATAGAGGAAAGGATTTATCAAAAAATAGTAGAGCTTTAAGAAGA 388961 Query 196073 CTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGTT 196132 | || || ||||||| | || ||||| || | |||||| | ||||| | | || Sbjct 388962 TTAAGAACACAATGTGAAAGAGCAAAACGTACATTATCTTCTTCAACTCAAGCCACTATT 389021 Query 196133 GAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCACGTTT 196191 || || ||||| | || || || ||||| || || | ||| ||| | || | || Sbjct 389022 GAAATCGATTCCCTTTTCGAAGGTATTGA-TTATAGTGTAACAGTTAGTAGAGCTAGATT 389080 Query 196192 TGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGA-ACCTGTTGAACAAGTACTTC 196250 |||||| ||| ||| | |||| || | || | ||| |||||| |||| | Sbjct 389081 TGAAGAATTATGTATTGACTATTTTA-GAGATACATTAATACCAGTTGAAAAAGTTTTAA 389139 Query 196251 GTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACCC 196310 || || | |||||| || | || ||||| ||||| | || || ||||| || Sbjct 389140 AAGATGCCATGATGGACAAAAAGAGTGTCCATGAAGTTGTCTTAGTTGGTGGATCTACAA 389199 Query 196311 GTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAAA 196369 | ||||| || |||||| | || | || ||||| ||| ||||| | || | Sbjct 389200 GAATTCCAAAAATTCAA-ACATTAATAAAAGAATTCTTTAATGGAAAAGAAGCATGCAGA 389258 Query 196370 ACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTCA 196429 | || || || |||||||| |||||||||||||| || ||||| ||||| ||| | ||| Sbjct 389259 TCAATAAATCCTGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCCATTTTATCA 389318 Query 196430 GGTGTTGACAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCCC 196487 |||| | |||| ||| || |||||| | | || | ||||| || |||| Sbjct 389319 GGTGAT--CAATCCAATGCAGTACAAGATTTATTATTATTAGATGTCTGTTCCTTATCTT 389376 Query 196488 TGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATTC 196547 | || | ||||| || || ||||||||||| ||| | ||||| || || ||||| |||| Sbjct 389377 TAGGATTAGAAACTGCAGGAGGTGTTATGACAAAATTAATTGAAAGAAATACAACAATTC 389436 Query 196548 CGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATTC 196607 | |||| || ||| ||||| | || ||| | ||||||||||||||||| || | Sbjct 389437 CAGCTAAAAAAAGTCAAATCTTTACTACCTATGCTGATAATCAACCAGGTGTCTTAATAC 389496 Query 196608 AAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGAT 196666 ||||||||||||||||| | | |||| ||||| | || | || || |||| || Sbjct 389497 AAGTATATGAAGGAGAAAGAGCTTTAACAAAAGATAATAACTTATTAGGTAAATTTC-AT 389555 Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATATA 196726 || || |||||| |||| || || || ||||| ||| | ||| ||| ||||| Sbjct 389556 TTAGATGGTATTCCACCTGCTCCTAGGAAAGTACCACAAATTGAAGTTACCTTTGATATC 389615 Query 196727 GACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAAG 196786 || |||||||| || |||| |||||||||| || || | |||| ||| | | Sbjct 389616 GATGCAAATGGTATCTTAAATGTCACAGCTGTTGAAAAAAGTACTGGTAAACAAAATCAT 389675 Query 196787 ATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCAA 196846 || ||||| |||||||| || | | ||| || |||||||| | |||||| | Sbjct 389676 ATCACAATTACTAATGACAAAGGTAGATTATCTCCTGAAGAAATTGATAGAATGGTTAAT 389735 Query 196847 GATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATAAAT 196906 ||||| ||||| || | | |||||| || | | || | ||| || |||| | ||| Sbjct 389736 GATGCTGAAAAATATAAAGCAGAAGATGAAGAAAATAAAAAAAGAATTGAAGCAAGAAAC 389795 Query 196907 GATCTAGAAAA 196917 ||| ||||| Sbjct 389796 AGTCTTGAAAA 389806 >seq6 Length=1276811 Score = 322 bits (356), Expect = 6e-83 Identities = 931/1415 (66%), Gaps = 46/1415 (3%) Strand=Plus/Plus Query 195301 TATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGT 195360 |||||||||||||||||| ||||||||| ||||||||||||| |||||| | || Sbjct 625809 TATTGGTATCGATTTAGGTACTACTTACAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 625868 Query 195361 AGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGA 195420 || || | || || ||| ||||||| |||||||| || || | ||| || Sbjct 625869 TGAAATATTAAACAACGATTTAGGTAACCGTATTACTCCATCATATGTATCATTTGTTGA 625928 Query 195421 TAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTA---TGAACCCTA-TCA 195476 | ||| | ||||| || || || ||| | ||| ||||| | |||| | ||| Sbjct 625929 TGGAGAAAGGAAGGTTGGTGAAGCAGCTAAA--TTAGA-AGCTACTTTACACCCAACTCA 625985 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | ||||| ||||| | ||| | ||||| ||| | || ||| ||||| |||| | Sbjct 625986 A-ACTGTGTTTGATGTTAAGAGACTTATAGGTAGAAAATTTGATGATAAAGAAGTAGCAA 626044 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTA 195596 | |||| || | | |||||| | ||| | || | | || || | || | Sbjct 626045 AAGATAGAACTTTATTACCATATGAAATAGTTAACAATGACGGT---AAACCAAATATAA 626101 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAA-----TTTGCTCCCGAAGAAATTTCGTCTAT 195651 ||| || | | ||| || | | ||||| || ||| ||||| |||| Sbjct 626102 GAGTTCAAATAAA-----AGACAAACCCACTACTTTTGCACCTGAACAAATTAGTGCTAT 626156 Query 195652 GGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGC 195711 ||| || || ||||| || | ||| |||| || |||| ||| |||| ||| |||| Sbjct 626157 GGTTTTAGAAAAAATGAAAGAAATTGCCCAATCATTTTTGGGCAAACCTGTAAAAAATGC 626216 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 ||||| ||||||||||| || |||| |||| ||||| |||| || ||||| || |||| Sbjct 626217 TGTTGTTACTGTACCTGCATATTTCAATGATGCACAAAGACAAGCTACAAAAGATGCTGG 626276 Query 195772 TGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| || |||| | | || | ||||| || ||||| || || ||||| | | Sbjct 626277 TGCAATTGCTGGATTAAA-TATAGTACGTATTATTAACGAACCCACCGCTGCTGCTTTAG 626335 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 |||||||| | || || || ||||| | || | | || | | ||| | || | Sbjct 626336 CTTATGGTTTAGATAAAAAA------GAAGAAACAAGTATTTTAGTATACGATTTAGGAG 626389 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 ||||||| |||||||| || || | ||| || |||| |||| ||||| | || | Sbjct 626390 GTGGTACTTTTGATGTTTCTATTTTAGTTATAGATAATGGTGTATTTGAAGTCTATGCAA 626449 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | || ||| ||||||| |||| ||||||||||| ||| | | || | | | || | Sbjct 626450 CAGCAGGTAATACTCACTTAGGAGGTGAAGATTTTGATCAAAGAGTTATGGATTACTT-T 626508 Query 196011 CTGATGA-GTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGT 196069 | | | ||| ||| ||||| | |||| || | || || ||| ||| Sbjct 626509 ATAAAAATGTTTAAAAAAAAAAATAATATAGATCTTAGATCAGATAAAAGAGCTATTCAA 626568 Query 196070 CGGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC--TTCTACGGCTCAAACAA 196127 | || | | | |||| ||| ||| ||| | || || | | ||||| | | Sbjct 626569 AAATTAAGAAAAGAAGTTGAAATTGCAAAAAGAAACTTATCAGTTGTTCA-CTCAACCCA 626627 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 |||| ||||| | |||| ||| | |||| | ||| | || | || Sbjct 626628 AA-TTGAAATTGAAGATATAGTTGAAGGACATAACTTTTCAGAAACATTAACAAGAGCCA 626686 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 || ||||| ||||| |||||| ||||| | | | ||||||||| || ||||| Sbjct 626687 AATTCGAAGAATTAAATGATGATTTATTTAGAGAAACTTTAGAACCTGTTAAAAAAGTAT 626746 Query 196248 TTCGTGACGCAAAG-ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 | ||| ||||| ||| | || | || | ||||||||||| | || ||||| ||| Sbjct 626747 TAGATGATGCAAAATATGAAAAAAGCAAAA-TCGATGAAATTGTTTTAGTAGGAGGTTCA 626805 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 || ||||| || || || ||||| || || ||| |||||| |||||| ||| Sbjct 626806 ACTCGTATACCTAAAATCCAACAAATTATTAAAGACTTTTTCAATGGTAAAGAACCAAAT 626865 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 | | || ||||| |||||||| || || |||||||| || |||| |||| |||| | Sbjct 626866 AGAGGTATTAACCCAGATGAAGCCGTAGCATATGGTGCTGCTATTCAAGCTGGTATTATT 626925 Query 196427 TCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCC 196486 | ||| | || ||| || ||||| || | | | |||||| | || || | Sbjct 626926 TTAGGAG-----AAGAATTAC----AAGATGTTGTATTGTTAGATGTTACTCCATTAACT 626976 Query 196487 CTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATT 196546 | ||| ||||||| | |||||| |||||||| || | ||| | || || ||| ||| Sbjct 626977 TTAGGTATTGAAACTGTTGGTGGTATTATGACTCAATTAATTAAAAGAAATACAGTTATC 627036 Query 196547 CCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATT 196606 || || || || |||| ||||||||| ||| ||||||||||||| |||| ||| Sbjct 627037 CCAACAAAAAAATCACAAACCTTTTCAACTTATCAAGATAATCAACCAGCTGTTTTAATT 627096 Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGAT 196666 ||||| | |||||||||| | | | || ||||||||| || | || | || || Sbjct 627097 CAAGTTTTTGAAGGAGAAAGAGCATTAACTAAAGATAACCATTTATTAGGTAAATTTGAA 627156 Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCC 196701 || | || |||||| |||||| |||||||| || Sbjct 627157 TTATCTGGTATTCCACCTGCACAAAGAGGTGTACC 627191 >seq9 Length=1049758 Score = 208 bits (230), Expect = 1e-48 Identities = 1048/1634 (64%), Gaps = 47/1634 (3%) Strand=Plus/Minus Query 77951 CCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTA 78010 |||||| | ||||| ||| | || ||||| || || ||| ||||| || | || Sbjct 574083 CCTCAACATTTATTAATGAGAGTATCTATAGGAATACATATTGATGATCTTGAAAAGGCT 574024 Query 78011 CTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCACGCAACACCTACTTTGTT 78069 | ||||| ||| || |||||| ||| ||| |||| ||| || || || || || || Sbjct 574023 TTAGAAACTTATCATTTAATGTCTCAAAAATAT-TTTACTCATGCTACTCCAACATTATT 573965 Query 78070 TAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGA 78129 |||| | || || || | || || ||||| || || || || | | | || || Sbjct 573964 TAATTCGGGAACACCAAGGCCCCAAATGTCTTCATGCTTTTTATTATCGATGAAATCTGA 573905 Query 78130 CTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCTGG 78189 || || | ||||||| | || | | | ||||| ||| ||| || || Sbjct 573904 TTCGATAGAAGGTATATTTGAAACATTAAAGCAATGTGCATTAATTAGTAAAACAGCAGG 573845 Query 78190 TGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAA 78249 ||||||||| || | | || ||| || | | | || || |||||||||||||| Sbjct 573844 AGGTATAGGTGTTGCTGTACAAGATATTAGAGGTCAAAATTCTTATATTAGAGGAACTAA 573785 Query 78250 TGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGT 78309 |||| || |||| | |||| ||| | || || || |||| ||||||| | ||||| Sbjct 573784 TGGTATATCAAATGGTTTAGTTCCAATGTTAAGAGTTTTTAATGATACAGCAAGATATGT 573725 Query 78310 CAACCAAGCGGGTCG---TAGGAAGGGGTCATTCGCTATGTACCTTGAACCTTGGCACGC 78366 | |||| || | || ||||| || || ||| | || ||||||| |||||| | Sbjct 573724 AGATCAAGGTGGCGGAAAAAGAAAGGGTTCTTTTGCTGTATATATTGAACCATGGCACTC 573665 Query 78367 CGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAG 78426 ||| | | || ||||| || | | || || ||| | || ||| || | Sbjct 573664 AGATATTTTTGAATTTTTAGATTTAAGAAAAAATCACGGTAAAGAAGAATTGAGAGCTCG 573605 Query 78427 GGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGG 78486 |||||||| |||||| ||| | || ||| | |||||||| ||||| ||||| Sbjct 573604 TGATTTATTTTATGCTATTTGGGTACCTGATTTATTTATGAAAAGAGTAAAGGAAAATAA 573545 Query 78487 TAAATGGTCTCTTTTCTGTCCAGAT-AAGACTAAGGGTCTTTCAG---ATGTATACGGGG 78542 || ||| || | | || || || || | ||| ||| || || | | || | Sbjct 573544 AAACTGGACTTTAATGTGCCCTAATGAATGCCCAGG---TTTAAGTGAATCT-TGGGGTG 573489 Query 78543 AAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAATTG 78602 ||||||| |||||||| || || |||||||||| ||| | | | | || ||| || Sbjct 573488 AAGAATTTGAAAAATTATATACAAAATACGAAGCAGAAAATTTGGGAAAAAAAACAGTTC 573429 Query 78603 ATGCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTATA 78662 |||| || ||||| ||||| | ||||||||| || || || || |||| Sbjct 573428 TTGCACAAGATTTATGGTTTGCTATATTACAAAGTCAAATTGAAACTGGTGTACCATATA 573369 Query 78663 TGCTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAAAA 78722 || |||| ||||| || || || ||||| ||||| || |||| || ||| Sbjct 573368 TGTTATATAAAGATGCATGCAATTCTAAATCTAATCAAAAAAATTTAGGAACAATTAAAT 573309 Query 78723 GCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAA--GAATGAAACAGCTGTATG 78780 | ||| | || |||||| | ||||| || || | ||||| |||||| || Sbjct 573308 GTAGTAATTTATGTTGTGAAATTGTTGAATATAC--ATCACCTGATGAAGTAGCTGTTTG 573251 Query 78781 TAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGATTA 78840 |||||||| || || || || || ||||||||| ||||| ||| |||| ||| Sbjct 573250 TAATCTAGCTTCAATTGCATTATGTAAATTTGTTGATAGAGAAAAAAAAGAATTTAATTT 573191 Query 78841 TTCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGACCG 78900 | ||| | | || ||||| ||||| | |||| ||||||| || | ||||| | Sbjct 573190 TAAAAAATTATATGATATTACTAAAATTATTACTAGAAATTTAGATAAAATTATTGAAAG 573131 Query 78901 TAACTACTACCC-AGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGGTC 78959 || || ||||| | | ||| | ||| | || |||| | |||||| || ||||| Sbjct 573130 AAATTATTACCCAATTAAAGAAGCCGAAAGA-TCAAATAAAAGACATAGGCCTATTGGAA 573072 Query 78960 TAGGTGTTCAAGGATTGGCAGATGTATTCA-ACTTGTGTGGTCTTCCCTTCGATTGCGAA 79018 |||| || |||||||| |||||| ||| | ||| | | | ||| | || | || Sbjct 573071 TAGGAGTACAAGGATTAGCAGATACATTTATGCTTTTAAGAT-ATCCATATGAATCTGAT 573013 Query 79019 GATTC-AAGGACTATGAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGAA-- 79075 || | || || | | ||| || || |||||||| ||| |||| ||||||||| Sbjct 573012 GAAGCTAAAGAAT-TAAATAGAAGAATATTTGAGACTATGTATTATGCTGCTTTAGAAAT 572954 Query 79076 GCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGAGAGTTTCGAGGGTTCACCCGCT 79135 | ||| || | || || | ||||| || ||||| | | ||| || || Sbjct 572953 GTCTGTT--GAGTTAGCACAAGTAAATGGACCATATGAATCATATCAAGGTAGTCCAGCA 572896 Query 79136 TCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGAAGCTAAATACAGTGGTCGTTAC 79195 |||| | | ||| ||| | | |||| | || || || | | || Sbjct 572895 AGCAAAGGAATATTACAATTTGATATGT-GGAATGCAAAAGTAGAT--AATAAATATTGG 572839 Query 79196 GATTGGGATGCAATGAGAAAGCGTGTAATGACGAAGGGTCTGAGAAACAGTCTTCTCGTA 79255 ||||||||| | | | ||| ||| | | | || | ||||| |||||| || Sbjct 572838 GATTGGGATTTATTAAAAAAAAAAATAAGTATGCATGGATTAAGAAATTCTCTTCTTTTA 572779 Query 79256 GCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACCA 79315 ||||| ||||| || ||||| || | || || | || |||||||| | ||||||||| Sbjct 572778 GCACCTATGCCAACAGCTTCAACTTCACAAATTTTAGGAAATAATGAATCCTTTGAACCA 572719 Query 79316 TACACTACAAACATATATCTTCGTCGCACATTAGCTGGTGAATTTGTTGTGGTTAACAAA 79375 || || | ||||| ||| | || ||| ||||||||| |||| || || Sbjct 572718 TATACAAGTAACATTTATTACAGACGTGTTTTAAGTGGTGAATTCTTTGTTGTCAATCCT 572659 Query 79376 CATCTTGTT-GAAGAT-TTGAAGA-AGTTAGGTCTTTGGTCAAAAGAGATGA---AAGAC 79429 ||| ||||| ||||| || || || |||||||||| |||| |||| || | Sbjct 572658 CAT-TTGTTAAAAGATCTTTTTGATAG--AGGTCTTTGGGATGAAGATATGAAACAACAA 572602 Query 79430 TTAATGGTCAAAGCCGGAGGGAGTGTGCAAAACA-TAGTAGAGATACC-AGATAATATTA 79487 ||||| | | | ||| ||||| ||| | | |||| || ||||| || | | | | Sbjct 572601 TTAATTGCCCATAATGGA---AGTGTTCAATATATTAGT-GAAATACCTAGCGACT-TGA 572547 Query 79488 AAAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAATGTATTATCGACATGGCAGCGG 79547 || | | ||||| || ||||||||||| | |||||| |||||| || ||||| || | Sbjct 572546 AAGAATTGTATAAAACAGTTTGGGAAATCAAACAAAAAAATATTATTGATATGGCTGCTG 572487 Query 79548 ACAGGGGTCGTTTT 79561 | | ||| ||||| Sbjct 572486 ATCGTGGT-GTTTT 572474 Score = 170 bits (188), Expect = 3e-37 Identities = 168/217 (77%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 |||||||||| || || ||||| | || |||||||| ||||| ||||| |||||| | | Sbjct 615372 GTATGCAAATTTTCGTAAAAACATTAACCGGAAAAACAATCACTCTCGATGTTGAGCCAT 615313 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 |||| || || || || | ||||| || ||||||||||| ||||| || ||||| |||| Sbjct 615312 CAGATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCTGATC 615253 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 ||||| || | ||||||||||| ||||| | ||||||||| | || || ||||||| | Sbjct 615252 AGCAAAGATTAATTTTTGCTGGAAAACAATTGGAAGATGGAAGAACACTATCTGATTATA 615193 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 || | ||||| || || || |||| | ||| |||| Sbjct 615192 ACATACAAAAAGAATCAACCTTACATTTAGTTTTAAG 615156 Score = 154 bits (170), Expect = 2e-32 Identities = 168/223 (75%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 171857 GTAGTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGT 171916 || |||||||||||||||| ||||| | ||||||||||| ||||| || || ||||| Sbjct 615603 GTGGTATGCAAATCTTTGTAAAAACTTTAACTGGAAAAACAATCACTCTTGATGTTGAAC 615544 Query 171917 CGTCAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCG 171976 | || || || || || || | ||||| || || |||||||| ||||| ||||| || | Sbjct 615543 CATCTGATACCATTGAAAATGTTAAAGCTAAAATCCAAGATAAAGAAGGAATTCCTCCTG 615484 Query 171977 ATCAGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATT 172036 |||| ||| || | ||||| || || ||||| | ||||| || || || || |||||| Sbjct 615483 ATCAACAAAGATTAATTTTCGCCGGAAAACAATTGGAAGACGGCCGAACACTATCTGATT 615424 Query 172037 ACAACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCT 172079 | ||| ||||||| || || || |||| | ||| |||| || Sbjct 615423 ATAACATTCAAAAAGAATCGACCTTACATTTAGTTTTAAGACT 615381 Score = 154 bits (170), Expect = 2e-32 Identities = 172/230 (75%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 |||||||||| || || ||||| | || |||||||| ||||| ||||| ||||| | | Sbjct 615828 GTATGCAAATTTTCGTAAAAACATTAACCGGAAAAACAATCACTCTCGATGTTGAACCAT 615769 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 |||| || || || || | ||||| || ||||||||||| ||||| || ||||| |||| Sbjct 615768 CAGATACTATTGAAAATGTTAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCTGATC 615709 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 | ||| || | || || ||||| ||||| | |||||||| | || | |||| || | Sbjct 615708 AACAAAGATTAATCTTCGCTGGAAAACAATTAGAAGATGGCAGAACATTATCTGACTATA 615649 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAGGCTTCGGGGTGGT 172089 || | ||||| || |||||| ||||| | ||| |||| | | |||||| Sbjct 615648 ACATACAAAAAGAATCTACTTTACACTTAGTTTTAAGATTAAGAGGTGGT 615599 Score = 138 bits (152), Expect = 1e-27 Identities = 147/194 (76%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 171883 CTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAA 171942 ||| | ||||||||||| ||||| || |||||| | || || || || || || | ||| Sbjct 616033 CTTTCAGGAAAAACTATAACCCTTGATGTTGAGCCATCCGATACCATTGAAAATGTTAAA 615974 Query 171943 GCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGT 172002 || || ||||||||||| ||||| || || || ||||||||| || | ||||||||||| Sbjct 615973 GCAAAAATTCAAGATAAAGAAGGTATCCCTCCTGATCAGCAAAGATTAATTTTTGCTGGA 615914 Query 172003 AAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGAGTCTACTCTA 172062 ||||| | ||||||||| | || | ||||||| ||| | ||||| || || || || Sbjct 615913 AAACAATTAGAAGATGGAAGAACATTATCTGATTATAACATACAAAAAGAATCAACCTTA 615854 Query 172063 CACCTTGTTCTAAG 172076 || | ||| |||| Sbjct 615853 CATTTAGTTTTAAG 615840 >seq3 Length=1741454 Score = 141 bits (156), Expect = 1e-28 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || |||||||| ||||| || || ||||| | || Sbjct 1503871 ATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCATCT 1503812 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || ||||| || || | ||||| || || |||||||| ||||| ||||| || ||||| Sbjct 1503811 GATACAATTGAAAATGTTAAAGCAAAAATCCAAGATAAAGAAGGAATTCCCCCTGATCAA 1503752 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | ||||| ||||| ||||| | |||||||| | || | |||| || ||| Sbjct 1503751 CAAAGATTAATTTTCGCTGGAAAACAATTAGAAGATGGCAGAACTTTATCTGACTATAAC 1503692 Query 172042 GTTCAAAAGGAGTCTACTCTACA 172064 ||||||| || || || |||| Sbjct 1503691 ATTCAAAAAGAATCAACCTTACA 1503669 >seq4 Length=1703499 Score = 116 bits (128), Expect = 5e-21 Identities = 231/333 (69%), Gaps = 18/333 (5%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || ||||| || ||||| ||| || | | || | || || | | |||||| | ||| Sbjct 1122383 AAAATGAAAGAAACTGCTGAAAATTACTTAGGAAGAAAAGTACATCAAGCAGTTATTACT 1122442 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| || || | |||||||||| | || || ||||| ||||||| | ||||| Sbjct 1122443 GTCCCTGCATATTTTAATGATTCACAAAGGCAAGCAACAAAAGACGCTGGTAAAATTGCA 1122502 Query 195782 GGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 || ||| | ||| ||| ||||||| ||||||||||| || || || | |||| |||| | Sbjct 1122503 GGACTAGA-TGTTTTAAGAATTATTAATGAACCAACTGCAGCGGCTTTAGCTTTTGGTTT 1122561 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGT-ATTGATCTT--TGATCTCGGTGGTGGTAC 195897 || || ||| || | |||| || || | | || ||| | || || ||||| Sbjct 1122562 AGA----AAAAAG--TGATGGTAAA---GTCATAGCTGTTTATGACTTAGGAGGAGGTAC 1122612 Query 195898 GTTTGATGTCTCACTTCT--CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 |||||||| ||| || | |||||| ||| ||| | || || ||||| || || | Sbjct 1122613 ATTTGATGTTTCAATTTTAGAAATATT--AGGAGGTGTTTTTGAGGTAAAAGCCACAAAT 1122670 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 || |||| | |||| || |||||||| ||| Sbjct 1122671 GGAAATACCTCTTTAGGAGGAGAAGATTTTGAT 1122703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861857263520