Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20petteri_20[genbank_20GCA_5F000524515.1_202014 -01-31] 66 sequences; 18,931,523 total letters Query= NC_022763.1 Length=164297 Score E Sequences producing significant alignments: (Bits) Value seq11 86.0 7e-12 >seq11 Length=775211 Score = 86.0 bits (94), Expect = 7e-12 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 18024 CCAAATATTTACATTTTTATCTACTAATGTTTTTAAATTCGTATCACCTTTTAGGAACCA 18083 ||| || |||||||||| |||| |||||| ||| ||| || || || ||| ||||| Sbjct 160885 CCATATTCTTACATTTTTTTCTAATAATGTATTTCCATTTGTTTCTCCCCTTATAAACCA 160944 Query 18084 TAGTAACTCTTCC--GCTACTAATCTAAAAGCTACATGTTTTGTTGTTAGTAACGGGAAT 18141 || ||||||||| | ||| ||| | | || | ||||||||||| ||| || || Sbjct 160945 TAATAACTCTTCAATGATACC--TCTTACAAATAATTTTTTTGTTGTTAATAATGGAAAA 161002 Query 18142 CCTTCTGACAAATCGAATTTCATCGTGTAGTCGAAGATACTTAATGTACCTGTTCCCGTT 18201 ||| |||| ||||||||| | || | || |||||||| ||| || ||| Sbjct 161003 TATTCACTTAAATTAAATTTCATCATATATCCAAATTTACTTAATACACCAACACCTGTT 161062 Query 18202 CTATCA-CTTCTAATTTCTCCATGCTTAATTATGTATTCATATAA-ATCTAAA 18252 |||||| ||| | | | ||||||| | ||||| | | |||||| || |||| Sbjct 161063 CTATCATCTTGT-TTATTTCCATGCATTATTATATCAT-ATATAATATTTAAA 161113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525621966361520