Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20petteri_20[genbank_20GCA_5F000524515.1_202014 -01-31] 66 sequences; 18,931,523 total letters Query= NC_025412.1 Length=369360 Score E Sequences producing significant alignments: (Bits) Value seq3 102 2e-16 seq9 95.1 3e-14 >seq3 Length=1741454 Score = 102 bits (112), Expect = 2e-16 Identities = 134/183 (73%), Gaps = 2/183 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || |||||||| |||||| | || || ||| ||||| ||| | ||| Sbjct 1503856 AAAACATTAACCGGAAAAACAATCACTCTTGATGTTGAACCATCTGATACAATTGAAAAT 1503797 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||||||| || ||||| |||||||||||| || || |||||| | || || Sbjct 1503796 GTTAAAGCAAAA-ATCCAAGATAAAGAAGGAATTCCCCCTGATCAACAAAGATTAATTTT 1503738 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||| ||||| || || |||||||| || ||||| | || || ||| | || ||||| || Sbjct 1503737 CGCTGGAAAACAATTAGAAGATGGCAGAACTTTATCTGACTATAACATTCAAAAAGAATC 1503678 Query 206364 TAC 206366 || Sbjct 1503677 AAC 1503675 >seq9 Length=1049758 Score = 95.1 bits (104), Expect = 3e-14 Identities = 145/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 206185 AAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATCA 206244 ||||| | || |||||||| |||||| | || || ||| ||||| || | ||| Sbjct 615583 AAAACTTTAACTGGAAAAACAATCACTCTTGATGTTGAACCATCTGATACCATTGAAAAT 615524 Query 206245 GT-AAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303 || ||||| ||| || ||||| |||||||||||| || || |||||| | || || Sbjct 615523 GTTAAAGCTAAA-ATCCAAGATAAAGAAGGAATTCCTCCTGATCAACAAAGATTAATTTT 615465 Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363 ||||||||| || |||||||| || | || | | ||||| ||| | || ||||| || Sbjct 615464 CGCCGGAAAACAATTGGAAGACGGCCGAACACTATCTGATTATAACATTCAAAAAGAATC 615405 Query 206364 TACTCTTCACCTTGTTTTGAGACT 206387 || | || | ||||| ||||| Sbjct 615404 GACCTTACATTTAGTTTTAAGACT 615381 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1181819800622786