Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20petteri_20[genbank_20GCA_5F000524515.1_202014 -01-31] 66 sequences; 18,931,523 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 2e-12 >seq8 Length=1149163 Score = 87.8 bits (96), Expect = 2e-12 Identities = 189/277 (68%), Gaps = 8/277 (3%) Strand=Plus/Minus Query 136368 AAACTGGCAACATCAGGAAAGGGAATACTTGCTGTTGATGAATCTACAAATACTTGTGGG 136427 ||||| | | | ||||||||||||| | || | |||||||| ||| | || | | Sbjct 482307 AAACTTGTAGCCCCAGGAAAGGGAATTTTAGCCGCAGATGAATCAACACAAACAATTAAG 482248 Query 136428 AAAAGATTGGCTAGTATTGGAGTAGAAAATACAGAGGCAAATAGA-CAGGCATACAGAGG 136486 |||||||| | || ||| | | |||||||| | | ||||||| | || || ||| Sbjct 482247 AAAAGATTCGATAATATAAAAATCGAAAATACCGTTGAAAATAGAGCTAGC-TATAGAAA 482189 Query 136487 TATGTTATTTACCACAGAGGGATTAGGTAATTATATTAGTGGTGCTATCTTATTTGAAGA 136546 | |||||||| || | |||||||| || | |||| || || || ||||||||||| Sbjct 482188 TTTGTTATTTGGAACTAAAGGATTAGGAAAATTTATTTCAGGAGCAATATTATTTGAAGA 482129 Query 136547 AACACTATTTCAAGATCATGCTGATGGAGAAAGCATGATTGCAAA---GTTAGAGAAGCA 136603 ||| |||| ||| | ||| ||||| | | ||| | | ||| ||| | | || Sbjct 482128 AACTTTATTCCAAAAAAATGAAGATGGTG-TACCAT--TAGTAAACTTATTACATGATCA 482072 Query 136604 AGGAATTATACCAGGTATCAAGGTAGATAAAGGATTA 136640 | || |||||||| || || || || ||||| ||| Sbjct 482071 ACATATAATACCAGGAATTAAAGTTGACAAAGGTTTA 482035 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631426679072560