Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20petteri_20[genbank_20GCA_5F000524515.1_202014 -01-31] 66 sequences; 18,931,523 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq9 136 8e-27 >seq9 Length=1049758 Score = 136 bits (150), Expect = 8e-27 Identities = 152/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 282897 TGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGT 282956 ||||| || ||||||||| ||||| ||||||| | || | |||||| |||| |||| Sbjct 615624 TGTAAAGTAGATTCTTTTTGTATGTTATAGTCAGATAATGTTCTGCCATCTTCTAATTGT 615683 Query 282957 TTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTT 283016 || || || ||||| || | |||||| ||| || ||||| || || ||||| || ||| Sbjct 615684 TTTCCAGCGAAGATTAATCTTTGTTGATCAGGTGGGATACCTTCTTTATCTTGAATTTTT 615743 Query 283017 GCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTC 283076 ||||| || | || ||||| || || | ||| || ||||||||||| || || || || Sbjct 615744 GCTTTAACATTTTCAATAGTATCTGATGGTTCAACATCGAGAGTGATTGTTTTTCCGGTT 615803 Query 283077 AAAGTCTTAACGAATATCTGCAT 283099 || || || ||||| || ||||| Sbjct 615804 AATGTTTTTACGAAAATTTGCAT 615826 Score = 116 bits (128), Expect = 8e-21 Identities = 148/204 (73%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 282896 ATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTG 282955 |||||| || ||||||||| ||||| || |||| || || | ||||| || | ||| Sbjct 615167 ATGTAAGGTTGATTCTTTTTGTATGTTATAATCAGATAGTGTTCTTCCATCTTCCAATTG 615226 Query 282956 TTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT 283015 ||| || ||||| || || | ||| || ||| || ||||| || || ||||| || || Sbjct 615227 TTTTCCAGCAAAAATTAATCTTTGCTGATCAGGTGGGATACCTTCTTTATCTTGAATTTT 615286 Query 283016 TGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGT 283075 ||||| || | || ||||| || || | || || ||||||||||| || || || || Sbjct 615287 AGCTTTAACATTTTCAATAGTATCTGATGGCTCAACATCGAGAGTGATTGTTTTTCCGGT 615346 Query 283076 CAAAGTCTTAACGAATATCTGCAT 283099 || || || ||||| || ||||| Sbjct 615347 TAATGTTTTTACGAAAATTTGCAT 615370 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046738314851164