Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_004778.3 Length=129593 Score E Sequences producing significant alignments: (Bits) Value seq8 86.0 5e-12 >seq8 Length=956651 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 18815 CCTCCTCGCAACCTTAACACCATGTGCAACGTAGACTCCTTTTGAATATTGTAATCCGCC 18874 ||||||| || ||||| || | || || || || || ||||| ||||| ||||| | Sbjct 415511 CCTCCTCTTAATCTTAAAACTAAATGTAATGTTGATTCTTTTTGTATATTATAATCAGAT 415452 Query 18875 ATTGTTTTGGCGTCCTCCAGCTGTTTACCCGCATAAATAAGTCTCTGCTGATCCACGGGC 18934 | |||| | | || || | ||||| || ||| |||| | ||| |||||||| || Sbjct 415451 AATGTTCTTCCATCTTCTAATTGTTTTCCAGCAAAAATTAATCTTTGCTGATCAGGTGGG 415392 Query 18935 ACGCCCTCTTTGTCGGCAATTTTCTGTTTTACCTGGCCGACAGTATCGCCAGGCTCCGTT 18994 | || ||||| || |||||| ||| || | | | |||||| || || Sbjct 415391 ATACCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATAGTATCAGATGGTTCGACA 415332 Query 18995 TCGACGGTAATGGTTTTACCTGTTAAAGTTTTGACAAAAATTTGCAT 19041 || | || || ||||| |||||||| ||||| || ||||||||||| Sbjct 415331 TCAAGAGTGATTGTTTTTCCTGTTAATGTTTTTACGAAAATTTGCAT 415285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414572552422306