Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq11 731 0.0 seq7 518 2e-141 seq6 250 2e-60 seq4 102 6e-16 seq2 102 6e-16 seq3 98.7 8e-15 seq10 87.8 1e-11 >seq11 Length=733468 Score = 731 bits (810), Expect = 0.0 Identities = 1141/1610 (71%), Gaps = 40/1610 (2%) Strand=Plus/Minus Query 517131 TTTTCTTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGAT 517190 ||||||| |||| || ||| | ||| || ||| || ||| |||||| ||||||| | Sbjct 353152 TTTTCTTC--ATCTTCTGCTTTATATTTTTCAGCATCATTAACCATTCTATCAATTTCTT 353095 Query 517191 CTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTT----GTT 517246 | ||| ||||| || | ||||||||| || |||| || |||||| || Sbjct 353094 CAGGAGATAATCTACCTTTGTCATTAGTAATTGTGATATGATT----TTGTTTACCAGTA 353039 Query 517247 GATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCA 517306 ||| ||| | || || ||||| | ||||||||| ||||| | ||| ||||| |||||| Sbjct 353038 CTTTTTTCAACAGCTGTGACATTTAAAATACCATTTGCATCAATATCGAATGTAACTTCA 352979 Query 517307 ATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTA 517366 ||||| || || ||| |||||||||| || || || |||| |||| | || | || | Sbjct 352978 ATTTGTGGTACTTTTCTAGGAGCAGGTGGAATACCATCTAAATGAAATTTACCTA-ATAA 352920 Query 517367 -TTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACA---GT 517422 || || |||||||| | || ||| || || | | ||| || ||| |||| | Sbjct 352919 GTTGTTGTCTTTAGTTAGAGCTCTTTCTCCTTCATATACTTGTAT--TAA-TACACCTGG 352863 Query 517423 TTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT 517482 ||||||||| | ||| || ||||| | | |||||| ||||||||||| ||||| Sbjct 352862 TTGATTATCAGCATAGGTAGTAAAGATTTGACTTTTTTTTGCTGGAATTGTTGTATTTCT 352803 Query 517483 ATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 517542 ||||| | || ||||||| ||| ||||| |||||||| || | ||| | | | ||| Sbjct 352802 TTCAATTAATTTTGTCATAACACCTCCTGCAGTTTCTAATCCTAAAGATAAGGAACAGAC 352743 Query 517543 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACA---AGAATAGCTGC 517599 ||| | || | | || ||| | | ||| | |||| || | | ||| || || Sbjct 352742 ATCTAATAATAATAAATCTTGTACTG---CATTGGATTGATCACCTGATAAAATGGCAGC 352686 Query 517600 TTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTT 517659 ||||| |||||||||||| |||||||||||||||||||| | | | | || ||| Sbjct 352685 TTGAACAGCAGCACCATAAGCAACAGCTTCATCAGGATTTATTGATCTGCATGCTTCTTT 352626 Query 517660 ACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTA-GGAATACGAGATGATCCTCCA 517717 ||||| ||||| | || | || ||| | | || ||||| | | ||||| ||| Sbjct 352625 TCCATTAAAAAATTCTTTTATTAA--TGTTTGAATTTTTGGAATTCTTGTAGATCCACCA 352568 Query 517718 ACTAATACAATTTCATGCAC-CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTC 517776 ||||| |||| |||||| || || | |||||||| | | ||| |||||||||||| Sbjct 352567 ACTAAGACAACTTCATGGACACTCTT-TTTATCCATCATGGCATCTTTTAAAACTTTTTC 352509 Query 517777 AACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGT 517836 ||| ||| | ||||||| |||| ||| | |||||||||| |||||||| | Sbjct 352508 AACTGGTATTAATGTATCTCTAAAATAGTCGATACATAATTCTTCGAATCTAGCTCTACT 352449 Query 517837 AAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGT 517896 || || ||| |||||||||| ||||| || | |||||||| |||||| || | |||||| Sbjct 352448 AACTGTTACACTATAATCAATACCTTCAAAAAGAGAATCAATTTCAATTGTGGCTTGAGT 352389 Query 517897 CGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT 517956 |||||||||| || |||||| || | ||||||| ||| |||| ||||| ||| ||| | Sbjct 352388 TGAAGAAGATAATGTACGTTTTGCTCTTTCACATTGTGTTCTTAATCTTCTTAAAGCTCT 352329 Query 517957 --TGCTGATTGATTCAAATCTGTTT---TATATTTTCTCTTGAAATCTTCAACACACCAT 518011 | | ||||| |||||| || ||| |||||| || |||||||||||||| | Sbjct 352328 ACTATTTTTTGAT--AAATCTTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAG 352271 Query 518012 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 518071 | || | ||| ||||||||||||||||| || || | |||| ||||| || || | Sbjct 352270 TTAACTAAACGGTTATCAAAATCTTCACCACCTAAATGGGTATCTCCTGCTGTTGCCTTA 352211 Query 518072 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATA 518131 |||| || | |||||||||| || | | | |||||| || ||||| || | | Sbjct 352210 ACTTCAAATATACCATCTTCAATAGTAAGTAATGAAACATCAAAAGTACCACCTCCTAAA 352151 Query 518132 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 518191 || || || | || ||| ||||| | | ||||||| | |||||| |||| ||| Sbjct 352150 TCGAAGATTAATATATTTTTTTCTCCCTTTCCTTTTTTATGTAAACCATATGCAATAGCT 352091 Query 518192 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 518251 || ||||||||||| || |||||||||| |||||| | || |||||| | || |||||| Sbjct 352090 GCTGCAGTTGGTTCGTTTATAATTCTCATAACATTTAATCCTGCAATTGTACCAGCATCT 352031 Query 518252 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTT 518311 || || ||||||||||| || || |||||||||||||| || |||||||| |||| || Sbjct 352030 TTTGTTGCTTGTCTTTGAGAGTCATTAAAATATGCAGGTACTGTAATAACTGCATTTTTT 351971 Query 518312 ACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAA 518371 | ||| || | | | || ||| ||| ||||||||| ||||| ||| || ||| Sbjct 351970 ATAGATTTTCCTAAAAAGGCTTCTGCATTTTCTTTCATTTTTTGTAAAACCATAGAAGAA 351911 Query 518372 ATTTGTTCTGGGGAATATTGCTTGGATTCATTTTGATATGATACTTCAA-AATATGGTTT 518430 |||| ||| ||| | || || |||| |||||| ||||||| ||| | ||| Sbjct 351910 ATTTCTTCAGGGTGAAATAATTTTTTTTCACCTTGATAAACAACTTCAATCATAGGCTTT 351851 Query 518431 ATTACCA-ACATTA-ATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGG 518488 | | | || | | ||||| |||||||||| | |||||||| ||| ||| Sbjct 351850 TCTTCAATACCTGATTTAACTGTAAATGGCCAATGCTTCATATCACTTTGTACAGAAGAT 351791 Query 518489 TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATT 518548 || |||| | ||||||||||||| ||||||||| || | ||||| ||| || || Sbjct 351790 TCTGTAAATTTCCTACCAATTAATCTTTTTGCATCGAAGACTGTATTTTCTGGGTTTCTT 351731 Query 518549 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATAT 518608 ||| |||| | ||| |||||||| ||||| | |||||| || || || | |||||| Sbjct 351730 GCAACTTGGTTTTTAGCTGCATCACCAATTAATCTTTCTGTATCAGTGAAAGCAACATAG 351671 Query 518609 GATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCAT 518668 ||||| ||||| | |||||||| || || ||||| || ||||| || ||||| |||| Sbjct 351670 GATGGGGTTGTTCTGTTACCTTGGTCGTTGGCAATTATATCAACATTTTCATTTCTCCAT 351611 Query 518669 ACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAAtttt 518718 ||||| ||||| |||| || |||||||| ||||| ||||| || || Sbjct 351610 ACACCAACACAGGAGTAAGTGGTACCTAAATCGATACCTATAGCTATGTT 351561 Score = 167 bits (184), Expect = 2e-35 Identities = 226/311 (73%), Gaps = 13/311 (4%) Strand=Plus/Minus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGC-TAATGTTCTAAATACTCC 322143 ||||||||||| || || ||||| |||| || || ||| | | ||| ||||| || Sbjct 352255 TCAAAATCTTCACCACCTAAATGGGTATCTCCTGCTGTTGCCTTAACTTC-AAATATACC 352197 Query 322144 ATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTAC 322203 || | ||| | | ||| |||||||| ||||| ||| ||||||| || | | | || Sbjct 352196 ATCTTCAATAGTAAGTAATGAAACATCAAAAGTACCACCTCCTAAATCGAAGATTAATA- 352138 Query 322204 GTTACCACCAGtttttttATTCCATTTTTCACTTCC-TAAACCGTATGCAAGAGCTGCTG 322262 || ||||||| | || || | || |||||| ||||||| |||||||| Sbjct 352137 --TA-------TTTTTTTCTCCCTTTCCTTTTTTATGTAAACCATATGCAATAGCTGCTG 352087 Query 322263 CAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAG 322322 |||||||||| || || ||| | | ||||| ||| || |||||| || ||| ||| | Sbjct 352086 CAGTTGGTTCGTTTATAATTCTCATAACATTTAATCCTGCAATTGTACCAGCATCTTTTG 352027 Query 322323 TTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATAG 322382 |||||||||| || | ||||||||||||||| ||||| ||||||||||| || || |||| Sbjct 352026 TTGCTTGTCTTTGAGAGTCATTAAAATATGCAGGTACTGTAATAACTGCATTTTTTATAG 351967 Query 322383 GTTTTTGTAAA 322393 |||| |||| Sbjct 351966 ATTTTCCTAAA 351956 >seq7 Length=1182114 Score = 518 bits (574), Expect = 2e-141 Identities = 1114/1643 (68%), Gaps = 49/1643 (3%) Strand=Plus/Minus Query 517085 CTGTGAGTATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCT 517144 || ||| |||| || ||||| | |||||| || ||||| || || || |||||| Sbjct 597249 CTTTGAATATAGTTATCTAAGTTATTTTTTGATTCAACTTTTTCTCTTAAATTTTTATCT 597190 Query 517145 GCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTT 517204 | || |||||| || ||| || |||||||| | || ||||| |||| || ||||| Sbjct 597189 TCATCAGCAAATTTTTCAGCATCGTTAATCATTTTTTCTATTTGTTCTTTTGATAATCTA 597130 Query 517205 CCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTC 517264 || | |||||||||||| ||| ||| ||| |||| |||||| | || Sbjct 597129 CCTTTGTCATTAGTAATAGTTATACCTTTGCTTTTTCCTGTTCCTTTATCTTCTGCTTCA 597070 Query 517265 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 517324 |||| | ||||||||| ||| | | |||||| || || |||| ||| || ||||| Sbjct 597069 ACATGTAAAATACCATTTTTATCGACAGTAAATGTAACCTCGATTTTAGGTACACCTCTT 597010 Query 517325 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 517384 || |||||||| || || | | |||| |||| | || |||||||||||| ||| Sbjct 597009 TGTGCAGGTGGAATACCAGATAGTTCAAATTTTCCTAATAAATGATTATCTTTAGTTAAT 596950 Query 517385 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 517444 || ||| || || |||| ||| || ||| | | |||||||||| ||| |||| | Sbjct 596949 GCTCTTTCTCCTTCAAAAACTTGAATTAAAACAGCTGGTTGATTATCTTGATAGGTTGAA 596890 Query 517445 AATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAAT 517503 || | |||||||| || || ||| ||||| | ||| | |||| |||||||| Sbjct 596889 AAGGTTTGTGATTTTTTTGTTGGGATAACTGTATTTCTTTTAATTA-ATTGAGTCATAAT 596831 Query 517504 ACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 517563 |||||| | ||||| | ||| | || | ||||| ||||| | | |||| || ||| Sbjct 596830 ACCACCAACAGTTTCAATACCTAAAGTTAATGGAGTAACATCTAACAATACAACATCTTG 596771 Query 517564 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 517623 | || ||| || | || |||| | ||||||||||||||||||||||| || Sbjct 596770 TAATTCTTC---------TCCTAAAATAATACCAGCTTGAATAGCAGCACCATATGCTAC 596720 Query 517624 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAG 517683 ||||||||| || |||| | | |||| ||| ||||||||||||||| | | || || Sbjct 596719 AGCTTCATCTGGGTTAATACCTCTATTTGGTTCTTTACCATTGAAAAAGTCTTTAATAAT 596660 Query 517684 TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 517743 |||| | ||||| ||||||| ||| ||||| ||||| |||||||||| | | || Sbjct 596659 TTGTTGGATTTTAGGTATACGAGTTGAACCTCCTACTAAAACAATTTCAT-CGATTTTGC 596601 Query 517744 TTTATCCA-GTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACA 517802 ||| | || ||||| ||| ||| ||||||| ||| ||||| | | ||||||||| Sbjct 596600 TTTTTTCATATTTTGCATCATCTAATACTTTTTTAACAGGTTCTAAAGTTTCTCTAAACA 596541 Query 517803 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 517862 | || | | |||||||||||| ||||| || | || | | | | | ||||| Sbjct 596540 AATCATCATTTAATTCTTCGAATTTGGCTCTTGTTAATGTTTCTGAAAAGTTATGTCCTT 596481 Query 517863 CGAACAAAGAATCAACTTCAATCGTAGT-TTGAGTCGAAGAA--GATAGTGCACGTTTAG 517919 | | | | |||| |||||| | || |||||| ||| || |||| | ||| | Sbjct 596480 CAACTATATCTTCAATTTCAAT--TTGTGTTGAGT-GAACAACTGATAAGTTTCTTTTTG 596424 Query 517920 CACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT-TGAT-TCAAATCTGT 517977 || |||| | || | |||| | || | | ||| || | || |||| | | |||| | Sbjct 596423 CAATTTCAACTTCTTTTCTTAATTTTTGAATAGCTCTT--TTATCTGATCTAAGATCTAT 596366 Query 517978 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATT--ATCAAAATCT 518035 |||| |||| | || || || || | | || | || || || |||||||||| Sbjct 596365 ATTATTTTTTTTTTTAAACATTTTAATAAA--ATAATCCATAACTCTTTGATCAAAATCT 596308 Query 518036 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 518095 |||||||| || | |||||| |||| || || |||| || | |||| || | | Sbjct 596307 TCACCTCCTAAGTGAGTATTACCTGCTGTTGCATAGACTTCAAATACACCATTATCTATA 596248 Query 518096 GACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 518155 |||| || |||||| || ||||| || | ||| ||| | || | || | Sbjct 596247 ACTAAAATAGAAACATCAAAAGTACCACCTCCTAAATC--GTATACTAAAAT--ACTTGT 596192 Query 518156 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 518215 | |||| |||||||| | |||||| || ||||||||||| || |||||||||||||| Sbjct 596191 T--TCTTCTTTTTTATCTAAACCATAAGCTAAAGCAGCAGCGGTGGGTTCATTAATAATA 596134 Query 518216 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 518275 | | | ||| | ||||||||| || |||||||| || ||||||||||||| ||| Sbjct 596133 CGTACTATATTTAATCCAGCAATTGCACCAGCATCTTTTGTAGCTTGTCTTTGTGCATCA 596074 Query 518276 TTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTT 518335 || ||||||||||| ||||||| ||| |||| | || |||||| | | | | Sbjct 596073 TTGAAATATGCAGGTACAGTAACAACAGCATTTTTGACGGGTTTACCCAAAAATGATTGA 596014 Query 518336 GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG-GGAATATTGCTT 518394 || ||| ||||||||| ||||| ||| | ||||||||| || | || | | | Sbjct 596013 GCAATTTCTTTCATTTTTTCTAAAACCATAGCACTAATTTGTTCAGGTGCAAAAGTAGTG 595954 Query 518395 GGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC---TTT 518451 || || ||| || ||| ||| | || |||| ||||| |||| | || || Sbjct 595953 GGTTTGTCTTTTATTTGA-ACTCTTATATTTGGT---TTACCTTCATTGTTTACTATTTC 595898 Query 518452 AAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAA 518511 | |||| | | | ||||| | || || |||| ||| | |||||| || | Sbjct 595897 ATATGGTAATAAAGTTCTATCTTTTGCTACTTCTTTATCATCAAATTTTCTACCTATAAG 595838 Query 518512 TCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATC 518571 || || | ||||| | ||| | ||||| | | | ||||| |||| ||||| || Sbjct 595837 TCTCTTAACGTCAAATACAGTTTGAGTTGGGTGTAAAGTAGCTTCTAATTTAGCTGCTTC 595778 Query 518572 TCCAATCAGATGTTCTGTCTCTGT----AAATGAAACATATGATGGAGTTGTGCGATTAC 518627 |||| | | || |||| | |||||| |||||||||||||| | || |||| Sbjct 595777 ACCAA----CTTTCCTTTCTCCATCAACAAATGATACATATGATGGAGTAATACGGTTAC 595722 Query 518628 CTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAG 518687 || |||||| | ||||||||| | ||||||| ||||||| |||||||| ||| Sbjct 595721 CTAAATCATTGTTTAATATTTCAACTCTTCCATTTTTAAATACACCAACACAACTGTAAG 595662 Query 518688 TTGTTCCTAAATCAATACCAATA 518710 | || |||||||| ||||||||| Sbjct 595661 TAGTACCTAAATCGATACCAATA 595639 Score = 120 bits (132), Expect = 2e-21 Identities = 211/303 (70%), Gaps = 17/303 (6%) Strand=Plus/Minus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGC-TAATGTTCTAAATACTCC 322143 ||||||||||| ||||| || || |||||||| || ||| || ||| |||||| || Sbjct 596316 TCAAAATCTTCACCTCCTAAGTGAGTATTACCTGCTGTTGCATAGACTTC-AAATACACC 596258 Query 322144 ATTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACAATTAC 322203 ||| ||| | | |||||||| ||||| ||| ||||||| || || || | | Sbjct 596257 ATTATCTATAACTAAAATAGAAACATCAAAAGTACCACCTCCTAAATCGTATACTAAAA- 596199 Query 322204 GTTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGC 322263 ||| || ||| ||| ||||| | ||||||| || || | ||| || || Sbjct 596198 --TAC-------TTGTTTCTTC--TTTTTTAT---CTAAACCATAAGCTAAAGCAGCAGC 596153 Query 322264 AGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGT 322323 || ||||||||||| || | | || ||| || |||||| | ||| ||| || Sbjct 596152 GGTGGGTTCATTAATAATACGTACTATATTTAATCCAGCAATTGCACCAGCATCTTTTGT 596093 Query 322324 TGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATAGG 322383 |||||||| ||||| ||||| |||||||| |||||||||| ||| || || || | || Sbjct 596092 AGCTTGTCTTTGTGCATCATTGAAATATGCAGGTACAGTAACAACAGCATTTTTGACGGG 596033 Query 322384 TTT 322386 ||| Sbjct 596032 TTT 596030 >seq6 Length=1590816 Score = 250 bits (276), Expect = 2e-60 Identities = 838/1285 (65%), Gaps = 47/1285 (4%) Strand=Plus/Minus Query 517094 TAAT-TTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTC 517152 |||| ||||| ||||||||| |||||| | |||||| | | |||| |||| Sbjct 1036982 TAATGTTTCTGCTTCATTTTTTGAATCAGTTAAATTTTTTTTATGTTGATCTTTTTCTCT 1036923 Query 517153 AAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT 517212 | | || |||||| || |||| | || |||| |||| | || | || | | | Sbjct 1036922 ATTTAATTCGGCTTCTTGAACCATTTTTTCGATTTCTTCTTTACTCAAACCACCACTACT 1036863 Query 517213 ATTAGTAATAGTAATATTCTTGGATTTG-TTTGTTGATTTATCAGCGGCAGTCACATTAA 517271 || | ||||| || || ||| ||| ||||| ||||||| || | | ||||| Sbjct 1036862 -TTGG--ATAGTTAT-TTGTTGTTTTTTATTTGTCATTTTATCAATAGCTGAAATATTAA 1036807 Query 517272 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 517331 ||| |||| ||||| | ||||||||||||||||||||| || || ||||| | || | Sbjct 1036806 TAATTGCATTTGCATCAACATCAAATGTGACTTCAATTTGTGGAACACCTCTTGGGGCTG 1036747 Query 517332 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 517391 |||| || || |||||| ||||| || || | ||||| || | | || || || Sbjct 1036746 GTGGTATACCAACCAAATCAAATGAACCTAGCATTTTATTGTCACAGGCCATTTCTCTTT 1036687 Query 517392 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 517451 | || | || | || |||| | ||| |||||||||||||| ||||| ||||||| Sbjct 1036686 CTCCTTGAAATACTTTGATACTGACTTGAGTTTGATTATCTGCTGCAGTTGAAAATACTT 1036627 Query 517452 TGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTG 517511 |||||||| ||||| ||||| ||||||| ||| | || || | || ||||||| Sbjct 1036626 GAGATTTTTTGGTTGGAATAGTTGTATTTCTATTAATTAATTTTGTAAAAACACCACCTA 1036567 Query 517512 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 517571 ||||| | ||| | ||| | ||| | ||||| | || | | || || | ||| Sbjct 1036566 AGGTTTCAATACCTAAAGATAAAGGTATAACATCTAATAATAATAAATCTTTTA---TTT 1036510 Query 517572 CATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 517631 | || ||| | || | |||| ||||||||||| |||| || ||||||| Sbjct 1036509 C-TCCTTTTAATACACCAC--------CTTGTATAGCAGCACCTAATGCTACTGCTTCAT 1036459 Query 517632 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT-- 517689 ||||||||||| ||| | | | || ||| |||| ||| | | ||| Sbjct 1036458 CAGGATTAACACTTTTTGATGGACTATT----TTGGAAAA-TTTCTTTTACTGTATCTGA 1036404 Query 517690 TACCTTAGGAATACGAGATGAT-CCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 517748 ||| || || || | | | || ||||||||||||| |||||||| | | ||| | Sbjct 1036403 TACTTTGGGCATTCTCG-TCATACCTCCAACTAATATAATTTCATTTATTTCATCTTTTT 1036345 Query 517749 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTG 517808 | |||| || || | ||||||| ||||||| | | | || || || Sbjct 1036344 TAATATTTGCGTCTTTTATACATTTTTCACATGGTTCAATAGTTCCCTTTAATAAATCGT 1036285 Query 517809 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATT---CCT--TC 517863 || | |||||| ||||||||||| || | | | | ||| || ||| | Sbjct 1036284 GGCATAATTCTTCTAATTTAGCTCTTGTTAATTTTATTTGTAAATGCTTTGGTCCTGTTT 1036225 Query 517864 GAACAA-AG-AATCAACT-----TCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTT 517916 || | || ||| || | ||| ||||| || | |||||| | || Sbjct 1036224 GATTAGCAGTAATAAAAGGTAAATTAATTTCTGTTTGTGTTTTACTTGATAGTTCGATTT 1036165 Query 517917 TAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT-TTGCTGATTGATTCAAATCT 517975 | ||| |||| |||| |||| |||| | || ||| || | | | || |||||| Sbjct 1036164 TTGCAGTTTCAGCTGCTTCTCTTAATCTTTGCAAAGCTAATTTATCACTTTTT-AAATCT 1036106 Query 517976 GTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCT 518035 | || | |||| | || || || | || | | || || | | | |||||||||| Sbjct 1036105 ATATTTTCTTTTTTTTTAAATTCATTAATAAAATATTCTAATATTCTTTGATCAAAATCT 1036046 Query 518036 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 518095 || ||||| || |||||||| || ||| |||| | |||| || || | Sbjct 1036045 TCTCCTCCTAAAGAGGTATTTCCATTTGTGGCTTTTACCTCAAAAACACCTCCTAATATT 1035986 Query 518096 GACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 518155 |||| | |||||| || || || || | ||| ||| | || | || Sbjct 1035985 TCTAAAATTGAAACATCAAATGTACCTCCTCCTAAGTCATAAACAGCTA------TGACT 1035932 Query 518156 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 518215 || | | |||| || | |||| | || |||||||| ||||||||||||||||||||| Sbjct 1035931 TTACCATCACTTTTTTCTAAACCAAAAGCTAAAGCAGCTGCAGTTGGTTCATTAATAATT 1035872 Query 518216 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 518275 || ||||||| ||||| |||||| | || |||||||| || ||||| ||||||||||| Sbjct 1035871 CTTAAAACATCTAGACCTGCAATTTTACCAGCATCTTTTGTTGCTTGCCTTTGTGAATCA 1035812 Query 518276 TTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTT 518335 |||||||||||||| ||||||||||| || | | ||||| | | || | ||| Sbjct 1035811 TTAAAATATGCAGGCACAGTAATAACTGCTTGATGTACTTTTCTTCCTAAGTAATTTTCA 1035752 Query 518336 GCCGTTTGTTTCATTTTACTTAAAA 518360 || |||| ||||||||| ||||| Sbjct 1035751 GCAGTTTCTTTCATTTTTTCTAAAA 1035727 Score = 154 bits (170), Expect = 1e-31 Identities = 209/295 (71%), Gaps = 21/295 (7%) Strand=Plus/Minus Query 322085 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCTAATGTTCTAAATACTCCA 322144 ||||||||||||||||| ||| ||||| ||| | ||| | ||| || || Sbjct 1036054 TCAAAATCTTCTCCTCCTAAAGAGGTATTTCCATTTGTGGCTTTTACCTCAAAAACACCT 1035995 Query 322145 TTTGAGATATTCATTAACGAAACATCTAAAGTCCCAGCTCCTAAGTCATAAACA---ATT 322201 | | || | | | |||||||| || || || ||||||||||||||||| || Sbjct 1035994 CCTAATATTTCTAAAATTGAAACATCAAATGTACCTCCTCCTAAGTCATAAACAGCTATG 1035935 Query 322202 ACGTTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCT 322261 || |||||| || |||||| ||||||| | || | ||| ||| Sbjct 1035934 ACTTTACCATCACTTTTTT------------------CTAAACCAAAAGCTAAAGCAGCT 1035893 Query 322262 GCAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGA 322321 ||||||||||||||||| ||| | | |||||||| ||| ||||||||| ||| ||| Sbjct 1035892 GCAGTTGGTTCATTAATAATTCTTAAAACATCTAGACCTGCAATTTTACCAGCATCTTTT 1035833 Query 322322 GTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTAT 322376 |||||||| || |||| |||||||||||||| || |||||||||||||||| || Sbjct 1035832 GTTGCTTGCCTTTGTGAATCATTAAAATATGCAGGCACAGTAATAACTGCTTGAT 1035778 >seq4 Length=1653377 Score = 102 bits (112), Expect = 6e-16 Identities = 214/314 (68%), Gaps = 4/314 (1%) Strand=Plus/Minus Query 671533 TGTTGAAGGAAAAAGAATTCAAATCAGATTCAATGGTAGAACACTTCCAATGTTCCCTAA 671592 ||| ||||| |||||||||| | | |||| ||| |||| || | ||| || ||| Sbjct 308275 TGTGGAAGGGAAAAGAATTCCATTTGGATTTAATCATAGATCATTACCACATTTTATTAA 308216 Query 671593 ATTCGATGACAGTGCATTTTCCAGAGGTTTT-TGTCGAAATTCTTTTATTGAG-GGTCTT 671650 ||| ||| | | | ||||| ||| ||||||| ||||| | || || || || Sbjct 308215 ATTTGATTATGGGCCCGAAAGTAGAGGATTTGTGTCGAA-TTCTTAT-TTAAGTGGGCTA 308158 Query 671651 GGACCTTTTGAATTTTTCTTCCAAGTAATGGCAGGTCGTGAAGGTATTATTAATACGGCT 671710 ||| ||| | || || || | |||| |||| | |||||||||||| |||| ||| Sbjct 308157 ACACCACAAGAAGTCTTTTTTCATGCTATGGGAGGTAGAGAAGGTATTATTGATACTGCT 308098 Query 671711 ATTAAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTTAAAATGCTCGAAGATATC 671770 |||||| | || ||||||||||| ||||||| | | ||||| | || ||| | Sbjct 308097 TGTAAAACATCAGAAACTGGTTATATACAAAGAAGATTAATTAAAGCTATGGAGGATGTT 308038 Query 671771 AAACAAGAATATGATGGTACAGTAAGAAATGCAAATGGTAAACTTATATCATGTGTTTAT 671830 | | | |||||| | ||||| |||||| || ||||| | |||| || | | ||| Sbjct 308037 ATGGTACAGTATGATAGAACAGTGAGAAATTCATATGGTGATATTATTCAATTTTTATAT 307978 Query 671831 GGTGATAATGGTAT 671844 ||||| |||| || Sbjct 307977 GGTGAAGATGGAAT 307964 >seq2 Length=2392314 Score = 102 bits (112), Expect = 6e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 870803 GTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACT 870862 || |||| |||||| ||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 1174181 GTTGATTTTTCTTCACCAAATATTGCAAAAGAAATGCATGTTGGCCATTTAAGATCAACC 1174240 Query 870863 ATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATT 870922 || | || || |||||| | ||||| ||| | | | | || | | Sbjct 1174241 ATATTAGGAGATACTATTTCCAAAGTATTTGAATTTTTAAAAGTAAAAACACATAGAGTC 1174300 Query 870923 AATCATGTGGGTGATTGGGGAACTCAATTCGGTATG 870958 |||||||| |||||||||||||| ||||| |||||| Sbjct 1174301 AATCATGTTGGTGATTGGGGAACACAATTTGGTATG 1174336 >seq3 Length=1704331 Score = 98.7 bits (108), Expect = 8e-15 Identities = 90/111 (81%), Gaps = 2/111 (2%) Strand=Plus/Plus Query 200572 ATTCATTATAATGATGAGGAAATTTCAAATCGATTCCACCAAAATGAATATC-AATACTA 200630 ||||||||| |||||| |||||| | ||||| | || ||| ||||||||| |||||| Sbjct 526350 ATTCATTATCATGATGTGGAAATCTTAAATCTACACCTCCACTATGAATATCTAATACT- 526408 Query 200631 TTTCCTAATGTTTTCTTGATCATGGCTGAACATTCAATATGCCAACCAGGT 200681 ||||||||| |||| | ||| | ||||||||||||||||||||| ||| Sbjct 526409 TTTCCTAATATTTTACTAGCCATAGTTGAACATTCAATATGCCAACCGGGT 526459 >seq10 Length=766960 Score = 87.8 bits (96), Expect = 1e-11 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 627199 GGTTTAGAAGTACGTGTACCATTTCTTGATTTTAATTATGTCGATTTTATTATGAATATT 627258 ||| |||||| | | ||||||||| | ||||| | | | | ||||| ||||||||| Sbjct 497624 GGTATAGAAGCAAGAGTACCATTTTTAGATTTAGAATTTTTAGATTTAGCTATGAATATA 497565 Query 627259 GATCCCAATTTATTGATGTATAAATCTGATTATATTGAAAAGAAAATTATTAGAGATGCT 627318 ||||| || | |||| | | || | |||||||| | ||| | ||| ||| Sbjct 497564 GATCCAAAAGAAAAAATGTGCTCAAATAATAAAATTGAAAAAGATATTTTAAGAAGAGCT 497505 Query 627319 TTCAAAGGCTATTTGCCCGAAAATATTCTTTACAGACCAAAAGAAGCTTTTTCTGATGCT 627378 || || ||||| || || |||||||||||||||| ||||||| ||||| |||| | Sbjct 497504 TTTGCTGGATATTTACCTGATAATATTCTTTACAGACAAAAAGAACAATTTTCGGATGGT 497445 Query 627379 GTT 627381 ||| Sbjct 497444 GTT 497442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780819968458594