Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq11 423 2e-113 seq7 224 1e-53 seq8 201 1e-46 seq4 197 2e-45 seq2 104 3e-17 seq6 98.7 1e-15 seq1 93.3 5e-14 >seq11 Length=733468 Score = 423 bits (468), Expect = 2e-113 Identities = 1098/1651 (67%), Gaps = 36/1651 (2%) Strand=Plus/Minus Query 6517 ATAACAGTAGTTTTCGAGACCATTCTTCGCCTCGAC-CTTTTTCGCGTACTTT--TCATC 6573 ||| || |||||||| |||| || | || || | |||||| || ||| ||||| Sbjct 353198 ATAGCAATAGTTTTCAAGACTGTTTCTTGCTTCAATTCTTTTTT---TATTTTCTTCATC 353142 Query 6574 TTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCT 6633 ||| ||||||| ||||| ||||| | ||||| | ||||| ||||| |||||||| Sbjct 353141 TTCTGCTTTATATTTTTCAGCATCATTAACCATTCTATCAATTTCTTCAGGAGATAATCT 353082 Query 6634 CCCCTTATCATTCGTAATCGTAATCT--TTTCGGATTTACCCGAGGCCTTATCTTCAGCA 6691 || || ||||| ||||| || || | ||| | |||||| | || || |||| Sbjct 353081 ACCTTTGTCATTAGTAATTGTGATATGATTTTG--TTTACCAGTACTTTTTTCAACAGCT 353024 Query 6692 CTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCC 6751 | ||||| ||||||||||||||||||| |||||| | || | |||||||||| Sbjct 353023 GTGACATTTAAAATACCATTTGCATCAATATCGAATGTAACTTCAATTTGTGGTACTTTT 352964 Query 6752 CTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCC 6811 || || || | ||||||||| ||||| |||| |||| | ||| |||| || | | Sbjct 352963 CTAGGAGCAGGTGGAATACCATCTAAATGAAATTTACCTAATAAGTTGTTGTCTTTAG-- 352906 Query 6812 TT----CTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867 || || | ||| |||||||| |||| ||| || | ||||||||||| Sbjct 352905 TTAGAGCT--CTTTCTCCTTCATATACTTGTATTAATACACCTGGTTGATTATCAGCATA 352848 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 || | |||||||| ||| || | |||||| || |||||||| ||| | || Sbjct 352847 GGTAGTAAAGATTTGACTTTTTTTTGCTGGAATTGTTGTATTTCTTTCAATTAATTTTGT 352788 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||||| ||| || |||||| | ||| | ||| | | || || || | ||| | Sbjct 352787 CATAACACCTCCTGCAGTTTCTAATCCTAAAGATAAGGAACAGACATCTAATAATAATAA 352728 Query 6988 GTCTTGAACAG-ATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGT 7046 ||||| || | ||| | | | |||| | ||| ||||| ||||| || | || || | Sbjct 352727 ATCTTGTACTGCATTGGATTGAT-CACCTGATAAAATGGCAGCTTGAACAGCAGCACCAT 352669 Query 7047 ATGCGACCGCCTCATCGGGGTTAATCGTTTT--ATTCAGTTCTTTACCGTTAAAATAATC 7104 | || || || ||||| || || || | | | || | |||||| || |||||| | || Sbjct 352668 AAGCAACAGCTTCATCAGGATTTATTGATCTGCATGC--TTCTTTTCCATTAAAAAATTC 352611 Query 7105 CGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATT 7164 || | | ||||||||| || |||| ||| |||||||| || || || | ||||| Sbjct 352610 TTTTATTAATGTTTGAATTTTTGGAATTCTTGTAGATCCACCAACTAAGACAACTTCATG 352551 Query 7165 CACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGT-TCCATACATT 7223 || || |||||| ||| | | ||| | |||||| || ||| | || || Sbjct 352550 GACACTCTTTTTATCCATCATGGCATCTTTTAAAACTTTTTCAACTGGTATTAATGTATC 352491 Query 7224 TACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAAT 7283 | | || |||| ||||| | ||| || || | || | ||| | | | ||| Sbjct 352490 T-CTAAAATAGTCGATACATAATTCTTCGAATCTAGCTCTACTAACTGTTACACTATAAT 352432 Query 7284 CAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTC 7343 ||| || || | | |||||||||||||| || | ||| | | |||||||| || | Sbjct 352431 CAATACCTTCAAAAAGAGAATCAATTTCAATTGTGGCTTGAGTTGAAGAAGATAATGTAC 352372 Query 7344 GCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATAT 7403 | ||||| | ||||| |||| ||| | | | || | || || | || Sbjct 352371 GTTTTGCTCTTTCACATTGTGTTCTTAATCTTCTTAAAGCTCTACTATTTTTTGATAAAT 352312 Query 7404 CTTT--CT-TATGTTTACGTTTAAACTCTTCAG-AGAAGTGTCGAAGGAGTCTCGAATCG 7459 |||| || ||| ||| | |||||| |||||| | || || || | | ||| Sbjct 352311 CTTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAGTT-AACTAAACGGTTATCA 352253 Query 7460 AAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCT 7519 |||||||||||||| || || ||||| || || || || || |||||||| ||||| || Sbjct 352252 AAATCTTCACCACCTAAATGGGTATCTCCTGCTGTTGCCTTAACTTCAAATATACCATCT 352193 Query 7520 TCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTC 7579 ||||| | | || ||||||||||| |||||||| || | || || || | || || Sbjct 352192 TCAATAGTAAGTAATGAAACATCAAAAGTACCACCTCCTAAATCGAAGATTAATATATTT 352133 Query 7580 GTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639 | || | | | || |||| | ||| || || ||||| || || |||||||| || Sbjct 352132 TTTTCTCCCTTTCCTTTTTTATGTAAACCATATGCAATAGCTGCTGCAGTTGGTTCGTTT 352073 Query 7640 ATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699 ||||| | | | || | || ||||| || | |||||||| || ||||||| ||| Sbjct 352072 ATAATTCTCATAACATTTAATCCTGCAATTGTACCAGCATCTTTTGTTGCTTGTCTTTGA 352013 Query 7700 GAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC 7759 || || ||||| || || || || || | || || | | | || || | | | Sbjct 352012 GAGTCATTAAAATATGCAGGTACTGTAATAACTGCATTTTTTATAGATTTTCCTAAAAAG 351953 Query 7760 GATTCCGCGATATCTTTCA-TTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAA 7818 | ||| || | ||||||| |||| |||| |||||| || ||||| ||||||| ||| Sbjct 351952 GCTTCTGCATTTTCTTTCATTTTTTGTAA-AACCATAGAAGAAATTTCTTCAGGGTGAAA 351894 Query 7819 CTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGAT 7878 ||| ||||||| | | || ||||||||||||| || || || || ||| | | Sbjct 351893 TAATTTTTTTTCACCTTGATAAACAACTTCAATCATAGGCTTTTCTTCAATACCTGATTT 351834 Query 7879 AACCTTATACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCC 7938 ||| || | | ||||| |||||||| ||| || || | ||| || || || Sbjct 351833 AACTGTAAATGGCCAATGCTTCATATCACTTTGTACAGAAGATTCTGTAAATTTCCTACC 351774 Query 7939 GATAAGACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGC 7998 || | | |||||||| || ||||| |||| ||||| | || |||||| || || Sbjct 351773 AATTAATCTTTTTGCATCGAAGACTGTATTTTCTGGGTTTCTTGCAACTTGGTTTTTAGC 351714 Query 7999 CGCGTCCCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCG 8058 || || || || | | ||| || || || || || || || |||||||| |||| Sbjct 351713 TGCATCACCAATTAATCTTTCTGTA---TCAGTGAAAGCAACATAGGATGGGGTTGTTCT 351657 Query 8059 ATTCCCTTGGTCGTTCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGA 8118 || ||||||||||| ||||| || || || || ||| ||| || || || || || Sbjct 351656 GTTACCTTGGTCGTTGGCAATTATATCAACATTTTCATTTCTCCATACACCAACACAGGA 351597 Query 8119 ATACGTTGTTCCTAAATCAATACCGATTGCT 8149 || || || |||||||| ||||| || ||| Sbjct 351596 GTAAGTGGTACCTAAATCGATACCTATAGCT 351566 >seq7 Length=1182114 Score = 224 bits (248), Expect = 1e-53 Identities = 828/1279 (65%), Gaps = 40/1279 (3%) Strand=Plus/Minus Query 6553 CTTTTTCGCGTAC-TTTTCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTT 6611 ||||||| | || |||| ||||||||| | | ||||| ||||| | | ||| |||| Sbjct 597212 CTTTTTCTCTTAAATTTTTATCTTCATCAGCAAATTTTTCAGCATCGTTAATCATTTTTT 597153 Query 6612 CAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTAC 6671 | || | |||||| |||||||| || || ||||| ||||| || || || | ||| | Sbjct 597152 CTATTTGTTCTTTTGATAATCTACCTTTGTCATTAGTAATAGTTATACCTTTGCTTTTTC 597093 Query 6672 CCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTA 6731 | | | |||||||| || |||| |||||||||||| ||| ||| || | | Sbjct 597092 CTGTTCCTTTATCTTCTGCTTCAACATGTAAAATACCATTTTTATCGACAGTAAATGTAA 597033 Query 6732 CATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAA 6791 | | |||| ||| ||| || |||| | ||||||||| | || |||||| | || | Sbjct 597032 CCTCGATTTTAGGTACACCTCTTTGTGCAGGTGGAATACCAGATAGTTCAAATTTTCCTA 596973 Query 6792 GTAAACTGTTATCCGTCGCCTTCTT--ACGTTCACCTTCATAGACTTTAATTGTCACCGC 6849 |||| ||||| | | || | | ||| |||||| | |||| |||| || || Sbjct 596972 ATAAATGATTATCTTTAG--TTAATGCTCTTTCTCCTTCAAAAACTTGAATTAAAACAGC 596915 Query 6850 AGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATT 6909 |||||||||||||| ||||| ||| ||||| ||| || | ||| || ||||| Sbjct 596914 TGGTTGATTATCTTGATAGGTTGAAAAGGTTTGTGATTTTTTTGTTGGGATAACTGTATT 596855 Query 6910 TCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGT 6969 ||| ||| | | |||||||||||||| | |||||| | || | || | || || Sbjct 596854 TCTTTTAATTAATTGAGTCATAATACCACCAACAGTTTCAATACCTAAAGTTAATGGAGT 596795 Query 6970 CACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGC 7029 || || || | || | ||||| | ||| |||| || | || | || Sbjct 596794 AACATCTAACAATACAACATCTTGTA---ATT------CTTCTCCTAAAATAATACCAGC 596744 Query 7030 TTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTT 7089 ||| | | || || ||||| || || ||||| |||||||| | |||| ||||||| Sbjct 596743 TTGAATAGCAGCACCATATGCTACAGCTTCATCTGGGTTAATACCTCTATTTGGTTCTTT 596684 Query 7090 ACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGAC 7149 ||| || ||| | || | |||||||| ||||| || || || || || || || || Sbjct 596683 ACCATTGAAAAAGTCTTTAATAATTTGTTGGATTTTAGGTATACGAGTTGAACCTCCTAC 596624 Query 7150 CAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTC-TCGAAGTGTTTTTTCGA 7208 ||||| ||||||| | ||| ||| || |||| || || || | ||||| | Sbjct 596623 TAAAACAATTTCATCGATTTTGCTTTTTTCATATTTTGCATCATCTAA-TACTTTTTTAA 596565 Query 7209 CAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCAC-GGGTA 7267 ||||||| | | || | ||||| || | | ||| || || || | | || Sbjct 596564 CAGGTTCTAAAGTTTCTCTAAACAAATCATCATTTAATTCTTCGAATTTGGCTCTTGTTA 596505 Query 7268 ATGGATGTATAGAAATCAACGCCGTC--GTATAACGAATCAATTTCAATGGTTGT-TTGT 7324 ||| | | | || | | || || |||| | ||||||||||| |||| ||| Sbjct 596504 ATGTTTCT-GAAAAGTTATGTCCTTCAACTATATC--TTCAATTTCAAT--TTGTGTTGA 596450 Query 7325 GCCGTCGA-AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGC 7383 | | | ||||| ||| ||||| ||| | ||| ||| ||| || Sbjct 596449 GTGAACAACTGATAAGTTTCTTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAATAGC 596390 Query 7384 ACGCGGGTTACCGGA---AATATCTTTCTTATGTTTACGTTTAAAC-TCTTCAGAGAAGT 7439 | ||| | || || |||| | |||| ||| ||||||| | || | | || Sbjct 596389 TC---TTTTATCTGATCTAAGATCTATATTATTTTTTTTTTTAAACATTTTAATAAAATA 596333 Query 7440 GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTT 7499 || | | ||| ||| ||||||||||| || ||||| |||| || || || || | Sbjct 596332 ATC-CATAACTCTTTGATCAAAATCTTCACCTCCTAAGTGAGTATTACCTGCTGTTGCAT 596274 Query 7500 TGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCA 7559 ||||||||| | ||| || || ||| | ||||||||||| |||||||| || | Sbjct 596273 AGACTTCAAATACACCATTATCTATAACTAAAATAGAAACATCAAAAGTACCACCTCCTA 596214 Query 7560 GGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAG 7619 || | | | | | || |||| || ||||| | ||| || || | || Sbjct 596213 AATCGTATACTAAAATACTTGT------TTCTTCTTTTTTATCTAAACCATAAGCTAAAG 596160 Query 7620 CCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCAT 7679 | || || || ||||||||||||||||| | || | |||||||| | | |||| Sbjct 596159 CAGCAGCGGTGGGTTCATTAATAATACGTACTATATTTAATCCAGCAATTGCACCAGCAT 596100 Query 7680 CTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCG 7739 |||| || ||||||| ||| | ||| || || || || || || || || || || | Sbjct 596099 CTTTTGTAGCTTGTCTTTGTGCATCATTGAAATATGCAGGTACAGTAACAACAGCATTTT 596040 Query 7740 TGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATG 7799 |||| ||||| | | | |||| || || ||||||||||| | |||||| | Sbjct 596039 TGACGGGTTTACCCAAAAATGATTGAGCAATTTCTTTCATTTTTTCTAAAACCATAGCAC 595980 Query 7800 AAATCTCTTCAGCCGCAAA 7818 ||| | ||||| ||||| Sbjct 595979 TAATTTGTTCAGGTGCAAA 595961 >seq8 Length=956651 Score = 201 bits (222), Expect = 1e-46 Identities = 983/1543 (64%), Gaps = 47/1543 (3%) Strand=Plus/Minus Query 104470 TGGTCTATATACACACCTCTATCCGCCGCCATATCGATGATTGTTTTTTGACTCATTTCC 104529 ||||| || | || || | || || |||||||| || || ||||||| | |||||| Sbjct 458172 TGGTCAATGAAAACCCCACGGTCAGCAGCCATATCAATAATATTTTTTTGTTTGATTTCC 458113 Query 104530 CATACGGTTTTATACAATTCCTTAAGATCATCGGGTATATCAATAATGTTTTGAACAGAC 104589 || || |||||||||||||| || | ||| ||||| ||| |||| | ||| ||| Sbjct 458112 CAAACTGTTTTATACAATTCTTTCAAGTCACTAGGTATTTCACTAATATATTGGACACTT 458053 Query 104590 CCATTTGCCTTCACCATAA---GATCTTTCATTTCCTTCGACCAGAGTCCACGTTCTTTC 104646 ||||| | | || | | | |||||| || | ||| || || ||| || Sbjct 458052 CCATTA---TGGGCAATTAATTGTTGTTTCATATCTTCATCCCAAAGACC----TCTATC 458000 Query 104647 AAA----TCGTTTACTAAATGTTTGTTTACGACGACAAATTCACCCGCGAGTGTTCGTCT 104702 ||| || |||| |||||| || || || | ||||||||| | ||||| Sbjct 457999 AAAAAGATCTTTTAATAAATGGGGATTGACAACAAAAAATTCACCACTTAAAACACGTCT 457940 Query 104703 CAAATAGATATTGGTCGTATACGGTTCGAAACACTCGTTGTTCCCTAAAATCTGGGATGT 104762 |||| || || | ||||| ||||| || | || || || |||||||| || || || Sbjct 457939 ATAATAAATGTTACTTGTATATGGTTCAAAGGATTCATTATTTCCTAAAATTTGTGAAGT 457880 Query 104763 GGATGCGGTAGGCATAGGTGCAAGAAGAAGACTATT-CATAGTTCCT---TTCTTAACAA 104818 || || || ||||||||||| | ||||||| ||| | || | | | | |||| Sbjct 457879 TGAAGCTGTTGGCATAGGTGCTAAAAGAAGAGAATTTCTTAATCCATGCATACTTATTTT 457820 Query 104819 GTTTACGCATGGCATTCCAATCG---TATCGACCACTAAACTTTGGGTCTCGATCCCACA 104875 ||| || || |||||| ||| | | | ||||| | || ||||| Sbjct 457819 TTTTTTTAATAA-ATCCCAATCCCAATATTTATTA-TCTACTTTTGC-----ATTCCACA 457767 Query 104876 TATCGAATTGAAGAATACCTTTACTAAACGGTGACCCCTTAAACGTTTCATAAGGACCGT 104935 |||| ||||| | || ||||| || || || | | | | |||||| || || | Sbjct 457766 TATCAAATTGTAATATTCCTTTGCTTGCTGGACTACCTTGATATGATTCATATGGGCCAT 457707 Query 104936 ACATTTCGGCAAGTTCACACGACGATTCGAGTGATGCGTGGTAGATAGTTTCGAATATAT 104995 | || || | |||| |||| ||| | | || | || |||||||| ||||| Sbjct 457706 TTACTTGTGCTAATTCAACCGACATTTCTAAAGCAGCATAATACATAGTTTCAAATATTC 457647 Query 104996 CAATGTTGAGTTTTCTCGATTCTTCTGAACCGAATGTCATTCTTAACATGATAAACACGT 105055 | || | || | | | ||| || || | ||| |||||| | ||||| | Sbjct 457646 TTCTATTTAATTCTTTAGCTTCCTCAGATTCATATGGATATCTTAAAAGCATAAATGTAT 457587 Query 105056 CAGCGAGACCCTGAACACCAATACCGATGGGTCTGTGACGCATATTTGAACGTTTCCCGT 105115 | || | || || || || || || || ||||| || | ||||||| || | | Sbjct 457586 CTGCTAATCCTTGTACTCCTATTCCAATAGGTCTATGTCTTTTATTTGATTTTTCAGCTT 457527 Query 105116 TTTCGGTTGGGTAAAAGTTTTTATCAATAACCTTGTTTAAGTTACGTGTAACCATTTTCG 105175 || |||||||| | ||| | ||||||| || | ||| || | |||| ||||| | Sbjct 457526 CTTTAATTGGGTAATAATTTCTTTCAATAATTTTATCTAAATTTCTAGTAATAATTTTAG 457467 Query 105176 TAACACGATGTAACTCTTCATGGTTAAACTCGTTCTTCTCGACATCAACGTATTTTGGTA 105235 ||| | | ||| | || | ||||| || || || || |||||| |||| || Sbjct 457466 TAATATCGTATAATTTTTTAAAATTAAATTCTTTTTTTTCTCTATCAACAAATTTACATA 457407 Query 105236 ACGCGATTGATGCGAGATTACATACGGCGGTTTCTTCC--TTATCCGTAAACTCCAGAAT 105293 | || ||||| || |||||||| || || ||| || | || ||| | || | ||| Sbjct 457406 ATGCAATTGAAGCTAGATTACAAACAGCTACTTCATCAGGTGAT--GTATATTCAATAAT 457349 Query 105294 TTCTGTACACAAATTTGATGATTTAATCGTACCAACGTGTTTATGGTTCGACTTTTCATT 105353 ||| ||| ||||| ||||||| || || | | ||| || || || || ||| Sbjct 457348 TTCACAACATAAATTACTACATTTAATTGTCCCTAAATTTTTTTGATTAGATTTAGAATT 457289 Query 105354 ACACGCGTCTTTGTAAAGCATATATGGGGTTCCCGTTTCACTTTGGGATT-TAATAATTG 105412 ||| || ||||| || | ||||||||| || |||||| ||||| || ||||| | | Sbjct 457288 ACATGCATCTTTATATAACATATATGGTACACCAGTTTCAATTTGGCTTTGTAATA-TAG 457230 Query 105413 CTTTCCAAATCTCCGAAGCTGGTACAACTTTAGTTGCGATACCTTCAGATTCGTATTTCT 105472 | ||| | || || | || ||| | | | | ||| ||| ||||| Sbjct 457229 CAAACCATAAATCTTGTGCAAGAACTGTTTTTTTACCTAAATTTTCTTCTTCATATTTTG 457170 Query 105473 CGTAAAGATCTTCAAACTCTTTACCGTACACGTCTGAAAGACCCTTTGCC--TGATCAGG 105530 || | | |||||| |||| ||| | || | ||| | | | | || ||| Sbjct 457169 TATATAATTTTTCAAATTCTTCACCCCAAGATTCACTTAAACC--TGGACATTCATTAGG 457112 Query 105531 ACAAAACAATGACCAATTACCATCGGATTCAACGCGTTTCATGAACAAATCTGGAATCCA 105590 ||| | || | ||| | || || ||| | ||||| || ||||| || | ||| Sbjct 457111 ACACATTAAAGTCCAGTGTTTATTTTCTTTAACCCTCTTCATAAATAAATCAGGTACCCA 457052 Query 105591 CATGGCTGAAAAGAGGTCTCGACACCTCGCCTCTTCATCACCTTGATTCAAACGAATTTC 105650 || || |||| | || ||| || ||||| | ||| ||||| | | || Sbjct 457051 TATAGCATAAAATAAATCACGAGCTCTTAATTCTTCTTTACCGTGATTTTTTCTTAAATC 456992 Query 105651 GAGAAAATCGAGAATATCGGCGTGCCATGGTTCTAAATAGACTGCAATAGACCCTTTACG 105710 | ||| || | |||||| | ||||||||| || | ||| || |||| ||| ||||| | Sbjct 456991 TAAAAATTCAAAAATATCAGAGTGCCATGGCTCAATATATACAGCAAAAGAACCTTTTCT 456932 Query 105711 A----CGCCCCGCTTGATTGACATATCTTGCGGTTGAGTTATACACTCGTAACATTGGAA 105766 |||| | |||||| ||||||||||| || ||| | |||| ||||||||||| Sbjct 456931 TTTTCCGCCAC-CTTGATCTACATATCTTGCTGTATCATTAAAAACTCTTAACATTGGAA 456873 Query 105767 TAATACCATCGGATGTTCCATTTGTTCCACGAATATGTGATTTATTTGCACGTACATCGT 105826 | |||| ||| | ||||| ||||| | ||||| || || | | | || | ||| | Sbjct 456872 CTAACCCATTTGATATACCATTAGTTCCTCTAATATAAGAATTTTGTCCTCGAATATCTT 456813 Query 105827 GAACGTGTAAC-CCAATACCCCCAGCCCACTTACTGATACGCGCACACTCTTTTACTGTA 105885 | || | ||| || ||||| || || |||||||| ||||| | |||| ||| Sbjct 456812 GTAC-AGCAACACCTATACCTCCTGCTGTTTTACTGATCAATGCACATTGCTTTAATGTT 456754 Query 105886 TCGTAAATACCGTCGATACTATCTTCCTT-ATTCGCAATCAGGAAACACGATGACATTTG 105944 || | ||||| || || ||| || ||| ||| | ||||| || |||||||| Sbjct 456753 TCAAATATACCTTCTATTGAATCAGATTTCATTGATAAT-AAAAAACATGAAGACATTTG 456695 Query 105945 TGGTCTGGGTGTACCAGCATTGAACAGAGTTGGTGTTGCATGA 105987 ||||| ||||| || | ||| || | || || || |||||| Sbjct 456694 GGGTCTTGGTGTTCCCGAATTAAATAATGTAGGAGTAGCATGA 456652 >seq4 Length=1653377 Score = 197 bits (218), Expect = 2e-45 Identities = 554/840 (66%), Gaps = 8/840 (1%) Strand=Plus/Minus Query 115062 ATAATCACCGACGCGCTTTTCAAAAAAGTTTGTTTTGCCGTCGAGTGATATATTCTCCAT 115121 |||||| | || | ||||||||| || |||||||| || | | ||||| ||||| Sbjct 1529746 ATAATCTGCAACTCTCTTTTCAAAGAAATTTGTTTTTCCTTGTAACGATATTAAGTCCAT 1529687 Query 115122 AAAATCAAAGGGATTTTTCGTGTTCCAGATTTTATTGTGACCCACTTGTTTTGATAATCG 115181 || ||| |||||||| | | | | |||| ||| | || | ||||||| Sbjct 1529686 CCAACTAAATGGATTTTTTGAATGGAAAACTTTAGAACAACCTAAACATTCTAATAATCG 1529627 Query 115182 ATCCGCAACATATTCGATATACTCCGACATTTTACCGGAATTCATACCTATGAGACTACA 115241 ||| |||||| |||||||||| | ||||| | |||||||| || || | | ||| Sbjct 1529626 ATCAGCAACAAATTCGATATATTGAGACATAAGTCTTGAATTCATTCCAATTAAATCACA 1529567 Query 115242 CGGAAGTGCGTCCGTAATGAATTCTTTTTCGATTGAAACGGCGTCTCTTATAATTTCTTC 115301 || | | || ||| ||| | |||| | | ||| || ||| | | || | || Sbjct 1529566 AGGTAAAGATTCACAAATAAATGATCTTTCTACTTCAACTGCTTCTTTAACTATATTTTG 1529507 Query 115302 AATTGTATTTTGAGATGGTTTGTTTTTTAACATGTTGAATAATTCAACCGC-AAATTCTT 115360 || | || | | ||| |||| ||||| | | | |||| ||| ||| || Sbjct 1529506 AACAACCTCTTCTGGTAATTTATTTTCTAACAAGCTATA-AATTAAACAATTAAAATCGG 1529448 Query 115361 GGTGCATACCTTCATCTCGACTTATGAGTTCATTACTAAAACATAAACC-TGGAAGTAAC 115419 ||| | |||||||| | ||| || | |||||||||||| |||||| || || | | Sbjct 1529447 TGTGTAATCCTTCATCCCTACTAATTAATTCATTACTAAATGTTAAACCATGTAATTTAT 1529388 Query 115420 CCTCTCTTTTTTAACCAAAAAATAGCACAAAAACTACCCGAGAAGAATATACCTTCAACA 115479 | | ||||| |||||||| || ||||||||||| || || ||||| ||||| ||| Sbjct 1529387 TTTGT-TTTTTAAACCAAAATATTGCACAAAAACTTCCACTAAATAATATTCCTTCGACA 1529329 Query 115480 CACGCAAAGGCTAATAAACGTTCAGCAAATGGTCGTTTCTTATCAAACCACTTCATAGCC 115539 || ||| |||| | | ||||||||| | | | | || | ||| || ||| Sbjct 1529328 CATGCATTAGCTACAATTCTTTCAGCAAAAGAATTTGTATCATTGATCCATTTAGCTGCC 1529269 Query 115540 CATTTCGCCTTTCTTTCGATACACGGAATTGTTTGAATTGCTTCGAATAATTGTTTCTTT 115599 ||| || || ||| || || || ||| ||| || | ||||| | | | | Sbjct 1529268 CATAATGCTTTATTTTTTATTGCTGGTATATTTTCAATAGCATGAAATAAATTTAACCTC 1529209 Query 115600 TCGCTAGAATTTTTTATATACTTGTCTATGAGTTTACTGTACGTTTCACCGTGTACCATT 115659 || | || || ||||| || || || | | ||| || |||||| |||| || Sbjct 1529208 TCTTTCTCATCCTTAATATAATTATCAATTAATAAACTATATGTTTCAGAATGTATATTT 1529149 Query 115660 TCATTGTGAGATTGATAGGCATAAAATGATCGAGCCTCCGTAAGTTGTATTTCATCTGCA 115719 ||| |||| | | ||||||| | || || | | ||||| || ||| | Sbjct 1529148 TCAACAGCTATTTGAAAAGAATAAAATTTTTTGGCTTCAATTATTTGTACCTC-TCTTAA 1529090 Query 115720 AAATT-ATTATTTATATTTTCAAAAACTATACCATCAGAACCAGCaaaaaaaGCTAAAAT 115778 ||||| | || | |||||| || ||||| |||||| | | |||||||| ||||| | Sbjct 1529089 AAATTTACTAGCCAAATTTTCTAATACTATTCCATCACTAGCTGCAAAAAATGCTAACAC 1529030 Query 115779 ATATTTTATAAAATGTTTTTCATTATCACTTAATTCATTCCAA-TCATCCATATCTTTGG 115837 || ||||||||||||||||||||| || |||||| ||| || || | || ||| | | Sbjct 1529029 ATGTTTTATAAAATGTTTTTCATTTACATTTAATTT-TTCAAAGTCTTTCAAATCACTTG 1528971 Query 115838 AAAAGTCTATCTCTTCAGCGGTCCAATTTGACATTTGGGCCTTTTTATACAAAGTCCATA 115897 | || |||||||||||||| |||||| ||| || || |||||||| ||| |||||| Sbjct 1528970 ATAAATCTATCTCTTCAGCAGTCCAAAATGAGGCTTCAGCTTTTTTATAAAAATTCCATA 1528911 >seq2 Length=2392314 Score = 104 bits (114), Expect = 3e-17 Identities = 255/383 (67%), Gaps = 13/383 (3%) Strand=Plus/Plus Query 22441 AAATTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCA---CAA 22497 ||||||||| | || || |||||||| | || ||||| | | ||| || | ||| Sbjct 1532569 AAATTTTATAATGCTTCAACATCAGAATTATATGGTAATAATATTCAAAGTCAATGCCAA 1532628 Query 22498 AATGAAAATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATAT 22557 |||||||||||||| ||| | || ||||| |||||| |||| ||||| | || Sbjct 1532629 AATGAAAATACACCATTTAATCCAGTCTCACCTTATGGGATAGCAAAATTATATAGTCAT 1532688 Query 22558 TGGGCGACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTC 22617 | ||| |||||||||||| |||| ||||||| ||||||||| | || Sbjct 1532689 TATATAACAAAAAATTATAGAGAAGCATATAATATGTTTTGTGTAAATGGTATATTATTT 1532748 Query 22618 AACCACGAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTC 22677 || || ||| || ||||| ||||||| ||||| ||| |||||| ||| ||| | Sbjct 1532749 AATCATGAAAGTCCAAGACGTGGTGAAACATTCGTTACAAAAAAAATTACAAAAGGTATA 1532808 Query 22678 GCTAATATCAGTGCAGGTAAACAAA-AATGTTTATACCTTGGTAACCTAGATGCGAAACG 22736 || || || | | | |||| | | ||||| | || || | ||| | | Sbjct 1532809 GCAAAAATATTTAAAAAAATTCAAACAGTTATTATA-TTAGGGAATATTGATACATTTAG 1532867 Query 22737 AGATTGGGGTCATGCACGCGAT----TACGTGAAATGTATGTGGAAAATATTACAACAAG 22792 |||||||||||||||| ||| ||| || ||| ||| | ||| ||||||||| Sbjct 1532868 AGATTGGGGTCATGCAAAAGATTATGTACATGCAATATATTT----AATGTTACAACAAA 1532923 Query 22793 ATAAACCGGAAGATTTTGTTATT 22815 | || | |||||||||||| Sbjct 1532924 CAACTCCTAATGATTTTGTTATT 1532946 >seq6 Length=1590816 Score = 98.7 bits (108), Expect = 1e-15 Identities = 190/275 (69%), Gaps = 8/275 (3%) Strand=Plus/Plus Query 11452 CCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGCCAATTCA 11511 |||| |||||||||||||| ||||| |||||| | ||| || || | ||| | || Sbjct 529577 CCAACAGCATCAATTTCATCAATAAAAATAATAGATGGTGCATGTTTTCTTGCTTGTGCA 529636 Query 11512 AATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGATGA---C 11568 |||| || | |||||| || |||| |||||||| | ||||| || || | | Sbjct 529637 AATAATTCTCTAACTCTTGATGGTCCTATTCCTACAAATACTTCAATAAA--ATCACTTC 529694 Query 11569 CCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAAGTGTT 11628 | | || | | || ||| ||||| | ||||| || | ||| |||||| || ||| Sbjct 529695 CACTAATA-TTAAAAAAGGGAACATTTGCCTCACCAGCAACAGCTTTTGCTAATAGAGTT 529753 Query 11629 TTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC-GGTACC 11687 || || || || ||| ||| |||||||||||| |||||||||| ||||| ||| Sbjct 529754 TTTCCGGTTCCCGGTGCACCACATAATAATGCACCTTTTGGTATTTTTGCACCTAATACT 529813 Query 11688 AAAGTACTTTTCTGGCGCCTTGAGAAAATCAACAA 11722 | || ||| |||| || | ||||||||||| Sbjct 529814 TGA-TATTTTGCTGGATTTTTCAAAAAATCAACAA 529847 Score = 96.9 bits (106), Expect = 4e-15 Identities = 199/296 (67%), Gaps = 0/296 (0%) Strand=Plus/Minus Query 6697 ATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGG 6756 ||| | ||| |||||||||||||||| || | || | ||||||||| ||| || || Sbjct 1036811 ATTAATAATTGCATTTGCATCAACATCAAATGTGACTTCAATTTGTGGAACACCTCTTGG 1036752 Query 6757 TGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTT 6816 || | ||| ||||| |||||||||| ||| || | | || || ||| | | Sbjct 1036751 GGCTGGTGGTATACCAACCAAATCAAATGAACCTAGCATTTTATTGTCACAGGCCATTTC 1036692 Query 6817 ACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAA 6876 | ||| |||| | | ||||| || | || || |||||||||| ||| ||||| || Sbjct 1036691 TCTTTCTCCTTGAAATACTTTGATACTGACTTGAGTTTGATTATCTGCTGCAGTTGAAAA 1036632 Query 6877 GATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATACC 6936 | ||| ||| || | |||||| || |||||||| ||| | || | || ||| Sbjct 1036631 TACTTGAGATTTTTTGGTTGGAATAGTTGTATTTCTATTAATTAATTTTGTAAAAACACC 1036572 Query 6937 ACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTT 6992 ||| | ||||| | || | ||| | |||| | || || || | ||| | |||| Sbjct 1036571 ACCTAAGGTTTCAATACCTAAAGATAAAGGTATAACATCTAATAATAATAAATCTT 1036516 Score = 91.5 bits (100), Expect = 2e-13 Identities = 185/271 (68%), Gaps = 8/271 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||| |||||||| || || || |||| || || ||||| || ||||| | ||| Sbjct 1036055 ATCAAAATCTTCTCCTCCTAAAGAGGTATTTCCATTTGTGGCTTTTACCTCAAAAACACC 1035996 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 |||| || | ||| | ||||||||||| ||||| || || | |||| ||| || Sbjct 1035995 TCCTAATATTTCTAAAATTGAAACATCAAATGTACCTCCTCCTAAGTCATAAACAGCTAT 1035936 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 | || | || |||| |||| | ||| | || | ||| || || |||||||| Sbjct 1035935 GACTTTACCATCA-CTTTTTTCTAA-----ACCAAAAGCTAAAGCAGCTGCAGTTGGTTC 1035882 Query 7636 ATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 ||||||||| | || ||| | || || ||||| | | |||||||| || ||||| | Sbjct 1035881 ATTAATAATTCTTAAAACA-TCTAGACCTGCAATTTTACCAGCATCTTTTGTTGCTTGCC 1035823 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGT 7725 ||| ||||| ||||| || || || || || Sbjct 1035822 TTTGTGAATCATTAAAATATGCAGGCACAGT 1035792 >seq1 Length=2470179 Score = 93.3 bits (102), Expect = 5e-14 Identities = 167/244 (68%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 11438 TACTTCTTTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTT 11497 |||||||||| ||| | ||||| |||||||| ||||| | ||| || ||| || || Sbjct 1131585 TACTTCTTTTAGAACCTACTGCATCTATTTCATCAATAAAAACAATGCAAGGTGCATGTT 1131644 Query 11498 CACGTGCCAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAA 11557 ||| || ||| | || | | |||| |||| ||||| || ||||||||||| Sbjct 1131645 TTTTTGCGGTTTGAAAAAGCTCTCTTATTCTTCTTGCACCTACACCAACAAACATTTCTT 1131704 Query 11558 CGAACGATGACCCCGAACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTG 11617 | || ||| || || || |||||||| || | ||| || || ||||| | | Sbjct 1131705 CAAATTCTGAACCAGATGCTTGGATAAAAGGCACATTTGCTTCCCCTGCAATAGCCCTAG 1131764 Query 11618 CTAAAAGTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAG 11677 | | | |||||| ||||| || |||| |||| ||||||| ||| | || | ||| | Sbjct 1131765 CAATTAATGTTTTTCCTGTTCCAGGTTCTCCTGATAATAATATACCTTTGGGCAATTTTG 1131824 Query 11678 CACC 11681 |||| Sbjct 1131825 CACC 1131828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132410981160