Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq11 360 2e-93 seq7 277 1e-68 seq8 190 2e-42 seq4 168 5e-36 seq6 143 2e-28 seq2 143 2e-28 seq5 140 3e-27 seq10 129 5e-24 seq1 127 2e-23 seq3 125 6e-23 seq13 113 4e-19 >seq11 Length=733468 Score = 360 bits (398), Expect = 2e-93 Identities = 575/819 (70%), Gaps = 15/819 (2%) Strand=Plus/Plus Query 551790 GGAGATTCTCATCTTGGTGGCGAAGATTTTGATAATAGACTGGTATCATGGTGTGTTGAA 551849 |||||| | ||| | ||||| |||||||||||||| | | || | ||||||||| Sbjct 352224 GGAGATACCCATTTAGGTGGTGAAGATTTTGATAACCGTTTAGTTAACTTTTGTGTTGAA 352283 Query 551850 GATTTTAAACGAAAAAACAAAGTT---GATCTATCTACATCTGCCAAAGCTCTTCGTCGT 551906 ||||||||| ||||||| | || ||| |||| | | | | |||| | | | Sbjct 352284 GATTTTAAAAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCTTTAAGAAGA 352343 Query 551907 CTAAGAACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATT 551966 ||||||| || |||||||| ||||| | | || ||| |||||| |||| ||| Sbjct 352344 TTAAGAACACAATGTGAAAGAGCAAAACGTACATTATCTTCTTCAACTCAAGCCACAATT 352403 Query 551967 GAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTT 552026 ||| | ||||| | ||||| || |||||||||| | | || || || | ||| Sbjct 352404 GAAATTGATTCTCTTTTTGAAGGTATTGATTATAGTGTAACAGTTAGTAGAGCTAGATTC 352463 Query 552027 GAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGA 552086 ||||| | ||| || |||||| | ||| | |||||| ||| ||||||||| | Sbjct 352464 GAAGAATTATGTATCGACTATTTTAGAGATACATTAATACCAGTTGAAAAAGTTTTAAAA 352523 Query 552087 GATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGA 552146 ||| | | ||| |||||| | || |||||| |||| | |||||||||||||||||| Sbjct 352524 GATGCCATGATGGATAAAAAGAGTGTCCATGAAGTTGTCTTAGTTGGTGGATCTACAAGA 352583 Query 552147 ATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGT 552206 ||||| ||||||| | | ||| | ||| ||||| ||| || | || | | Sbjct 352584 ATTCCAAAAATTCAAACATTAATAAAAGAATTTTTTAATGGAAAAGAAGCA--TGCAGAT 352641 Query 552207 G--TTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTG 552264 | ||||| ||||| |||||||| |||||||| || ||||||| || ||| | || | Sbjct 352642 CAATAAATCCTGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCCATTTTATCAG 352701 Query 552265 GA---CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGT-TACTCCTCTATCT 552320 | ||| | ||| | ||||| || | || | ||||||| | |||| ||||| Sbjct 352702 GTGATCAATCCAATGCAG---TACAAGATTTATTATTATTAGATGTCTGTTCCT-TATCT 352757 Query 552321 CTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATT 552380 | || |||||||| | |||||| ||||||| || | || || |||||||| || ||| Sbjct 352758 TTAGGATTAGAAACTGCAGGAGGTGTTATGACAAAATTAATTGAAAGAAATACAACAATT 352817 Query 552381 CCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATT 552440 || |||||| || | ||| |||| ||| | ||||||||| | | ||| ||| Sbjct 352818 CCAGCAAAAAAAAGTCAAATCTTTACTACCTATGCTGATAATCAACCAGGTGTATTAATA 352877 Query 552441 CAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAAT 552500 ||| | | ||||||||||||| | |||||||| || || | | |||| ||| || Sbjct 352878 CAAGTATATGAAGGAGAAAGAGCTCTAACTAAAGACAACAACTTATTAGGTAAATTTCAT 352937 Query 552501 TTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATC 552560 ||||| |||||||| ||||||||| | |||||| |||||||||||||| |||||||| Sbjct 352938 TTAGATGGTATTCCACCTGCTCCTAGAAAAGTACCACAAATTGAAGTTACATTCGATATT 352997 Query 552561 GATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAA 552599 ||||| ||||| ||||| ||||| || ||| ||| ||| Sbjct 352998 GATGCAAATGGTATTTTAAATGTCACAGCTGTTGAAAAA 353036 Score = 309 bits (342), Expect = 2e-78 Identities = 406/555 (73%), Gaps = 12/555 (2%) Strand=Plus/Plus Query 549979 GTCAAACAAAGTAGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTG 550038 |||||||| ||||||||||||| |||||||| ||||| || ||||||||||| || Sbjct 351557 GTCAAACA---TAGCTATAGGTATCGATTTAGGTACCACTTACTCCTGTGTTGGTGTATG 351613 Query 550039 GCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTA 550098 | ||||| || ||||| || |||||||| || |||||||||||||| || ||||| || Sbjct 351614 GAGAAATGAAAATGTTGATATAATTGCCAACGACCAAGGTAACAGAACAACCCCATCCTA 351673 Query 550099 TGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGG 550158 |||| ||||||| || || ||| ||| ||||||||||||| ||| | |||| | | Sbjct 351674 TGTTGCTTTCACTGATACAGAAAGATTAATTGGTGATGCAGCTAAAAACCAAGTTGCAAG 351733 Query 550159 TAATCCTACCAATACTATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTC 550218 || || ||||| | || ||||| ||| | |||||||| || | |||| || || Sbjct 351734 AAACCCAGAAAATACAGTCTTCGATGCAAAAAGATTAATTGGTAGGAAATTTACAGAATC 351793 Query 550219 GACTGTTCAGGCAGATATGAAGCATTGGCC-TTTCCAAATTGTTAATGT-TTCTGGAAAA 550276 |||| || ||||||||||||||||| ||| || | | | || || ||||| Sbjct 351794 TTCTGTACAAAGTGATATGAAGCATTGGCCATTTACAGTTAAATCAGGTATTGAAGAAAA 351853 Query 550277 CCTTAT-ATTGAAGCTACTCATGAAGGATCTGTTAAACAAT--TTTCA-CCAGAACAAAT 550332 | ||| ||||||| | | || |||| || ||| ||| ||||| || ||| |||| Sbjct 351854 GCCTATGATTGAAGTTGTTTATCAAGG---TGAAAAAAAATTATTTCACCCTGAAGAAAT 351910 Query 550333 TTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAAGT 550392 ||| |||||||||||| ||||||||| ||| || || ||| | || || | Sbjct 351911 TTCTTCTATGGTTTTACAAAAAATGAAAGAAAATGCAGAAGCCTTTTTAGGAAAATCTAT 351970 Query 550393 TACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAA 550452 | ||||||| || || ||||| ||||||||||||||||| ||| | ||||| || || Sbjct 351971 AAAAAATGCAGTTATTACAGTACCTGCATATTTTAATGACTCTCAAAGACAAGCAACAAA 352030 Query 550453 AGATGCTGGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGC 550512 ||||||||| ||||| ||| | |||||| | | ||||| || ||||| ||||| || Sbjct 352031 AGATGCTGGTACAATTGCAGGATTAAATGTTATGAGAATTATAAACGAACCAACTGCAGC 352090 Query 550513 TGCACTTGCATATGG 550527 || |||||||||| Sbjct 352091 AGCTATTGCATATGG 352105 Score = 96.9 bits (106), Expect = 3e-14 Identities = 202/296 (68%), Gaps = 15/296 (5%) Strand=Plus/Minus Query 361546 ATCTATATCTTCACCACCTAAATGTGTA-CTACCGCTAACTGCTAATGTTCTAAATAAGC 361604 ||| | |||||||||||||||||| ||| || | ||| || | ||| ||||| | Sbjct 352256 ATCAAAATCTTCACCACCTAAATGGGTATCTCCTGCTGTTGCCTTAACTTC-AAATATAC 352198 Query 361605 CATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATAA 361664 ||| | |||| | | | ||||||| | || || | |||||||| | || | | Sbjct 352197 CATCTTCAATAGTAAGTAATGAAACATCAAAAGTACCACCTCCTAAATCGAAGATTAATA 352138 Query 361665 TATTCCCCCCGTTTTTATT--TTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGC 361722 |||| ||||| | ||||| ||||| | | |||||| || | | || Sbjct 352137 TATT-------TTTTTCTCCCTTTCCTT-TTTTATGT---AAACCATATGCAATAGCTGC 352089 Query 361723 AGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAA 361782 || ||||||||||| || ||| | |||||||| | ||| || ||| | |||||| Sbjct 352088 TGCAGTTGGTTCGTTTATAATTCTCATAACATTTAATCCTGCAATTGTACCAGCATCTTT 352029 Query 361783 AGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTTTT 361838 || ||||| | ||| | ||||||||||||||||| || ||||| ||||| |||| Sbjct 352028 TGTTGCTTGTCTTTGAGAGTCATTAAAATATGCAGGTACTGTAATAACTGCATTTT 351973 >seq7 Length=1182114 Score = 277 bits (306), Expect = 1e-68 Identities = 404/570 (71%), Gaps = 11/570 (2%) Strand=Plus/Plus Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAA 552074 || |||||||| ||||| | | |||| | |||||| |||| | ||||| || || Sbjct 596510 AGAGCCAAATTCGAAGAATTAAATGATGATTTGTTTAGAGAAACTTTAGAACCTGTTAAA 596569 Query 552075 CAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGT 552134 |||| ||| ||| |||| ||| ||| |||| | |||||||||| | || || Sbjct 596570 AAAGTATTAGATGATGCAAAATATGAAAAAAGCAAAATCGATGAAATTGTTTTAGTAGGA 596629 Query 552135 GGATCTACAAGAATTCCTAAAATTCGCGAAATG-TTAAGTTCTTATTTCAATGGTAAAAA 552193 || || || | || |||||||| | |||| |||| ||| ||||||||||||| | Sbjct 596630 GGTTCAACTCGTATACCTAAAATCCAACAAATTATTAAAGACTT-TTTCAATGGTAAAGA 596688 Query 552194 ATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGC 552253 | |||| | || |||| |||||||| ||||| || |||||||| || |||||||| | Sbjct 596689 ACCAAATAGAGGTATTAACCCAGATGAAGCTGTAGCATATGGTGCTGCTATTCAAGCTGG 596748 Query 552254 TATTCTTTCTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCC 552313 |||| ||| ||| ||| || ||||| || ||||| | ||||||||||||| Sbjct 596749 TATTATTTTAGGA---------GAAGAATTACAAGATGTTGTATTGTTAGATGTTACTCC 596799 Query 552314 TCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATAC 552373 || || | ||| | ||||| ||||| |||||||||||| | | || | |||||||| Sbjct 596800 ATTAACTTTAGGTATTGAAACTGTTGGTGGTATTATGACTCAATTAATTAAAAGAAATAC 596859 Query 552374 TACTATTCCTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGT 552433 ||| || |||||||| | ||||| || ||| |||||||||| | ||||| Sbjct 596860 AGTTATCCCAACAAAAAAATCACAAACCTTTTCAACCTATCAAGATAATCAACCAGCTGT 596919 Query 552434 TACAATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTAC 552493 | ||||||| ||||||||||||||||| ||| |||||||||||| || | | || | Sbjct 596920 TTTAATTCAAGTTTTTGAAGGAGAAAGAGCATTAACTAAAGATAATCATTTATTAGGAAA 596979 Query 552494 TTTTAATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTT 552553 ||| | || |||||||| ||||| | | || ||||| |||| || ||||| || Sbjct 596980 ATTTGAACTATCTGGTATTCCACCTGCACAAAGAGGTGTACCTAAAATCGAGGTTACATT 597039 Query 552554 CGATATCGATGCCAATGGAATTTTGAATGT 552583 | ||||| ||||| ||||| |||| Sbjct 597040 TACTGTCGATAAAAATGGTATTTTACATGT 597069 Score = 167 bits (184), Expect = 2e-35 Identities = 370/547 (68%), Gaps = 6/547 (1%) Strand=Plus/Plus Query 549994 TATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGT 550053 ||| ||||| |||||||| || || || |||||||||||||| | ||||||| | ||| Sbjct 595639 TATTGGTATCGATTTAGGTACTACTTACAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 595698 Query 550054 TGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCACGGA 550113 |||||| | ||||||| ||||||| | | ||||||||| ||||| || || || Sbjct 595699 TGAAATATTAAACAATGATTTAGGTAACCGTATTACTCCATCATATGTATCATTTGTTGA 595758 Query 550114 AACTGAACATTTAGTTGGTGATGCAGCAAAATATCAAGCCACTGGTAATCCTACCAATAC 550173 ||| ||||||||| ||||| |||| |||| ||| | || || | || Sbjct 595759 TGGAGAAAGGAAAGTTGGTGAAGCAGCTAAATTAGAAGCTACTTTACACCCAACTCAAAC 595818 Query 550174 TATTTTTGATGCTAAACGTTTAATTGGAAGAAGTTTTAATGATTCGACTGTTCAGGCAGA 550233 | | ||||| | ||| | | || || |||| ||| ||||| || ||| Sbjct 595819 TGTATTTGACGTTAAGAGACTTATAGGTAGAAAATTTGATGATAAAGAAGTAGCAAAAGA 595878 Query 550234 TATGAAGCAT-TGGCCTTTCCAAATTGTTAATGTTTCTGGAAAACCTTATATTGAAGCTA 550292 || ||| | | || | |||| || || | || ||||| |||| || | Sbjct 595879 TA-GAACTTTATTACCATATGAAATAGTAAACAATGAAGGTAAACCAAATATAAGAGTT- 595936 Query 550293 CTCATGAAGGATCTGTTAAACAATTTT-CACCAGAACAAATTTCATCTATGGTTTTAATG 550351 | || || || | | |||| |||| ||||||||| ||||||||||| Sbjct 595937 CAAATAAAAGACAAACCCACTACTTTTGCACCTGAACAAATTAGTGCTATGGTTTTAGAA 595996 Query 550352 AAAATGAAACAAACAGC-CAGTGCTTTTGTTGGTCAAGAAGTTACGGATGCAGTAATAAC 550410 ||||||||| ||| || || | |||| | ||| || || | |||| || | || Sbjct 595997 AAAATGAAAGAAATTGCTCAATCATTTT-TGGGTAAACCCGTCAAAAATGCTGTTGTTAC 596055 Query 550411 TGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCTGGACGTATTGC 550470 |||||| |||||||| ||||| ||||| | |||||||| ||||||||||| ||||| Sbjct 596056 TGTACCTGCATATTTCAATGATGCACAAAGACAAGCTACAAAAGATGCTGGTGCAATTGC 596115 Query 550471 TGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGCACTTGCATATGGACT 550530 |||| | ||| | | |||||||| |||||||| || |||||||| | || ||||| | Sbjct 596116 TGGATTAAATATAGTACGTATTATTAATGAACCCACCGCTGCTGCTTTAGCTTATGGTTT 596175 Query 550531 TGATAAA 550537 |||||| Sbjct 596176 AGATAAA 596182 Score = 114 bits (126), Expect = 1e-19 Identities = 283/415 (68%), Gaps = 32/415 (8%) Strand=Plus/Minus Query 361431 TTTTGGCATTTTCAACAGCattttttaatttt--aattgagctaattta-ctgaactcga 361487 |||| ||| ||||||| | ||| |||||||| ||| |||| |||| |||| || | Sbjct 596429 TTTTTGCAATTTCAACTTCTTTTCTTAATTTTTGAAT--AGCTCTTTTATCTGATCTA-A 596373 Query 361488 gttttcgtattttatattttttttGAAAATCAAGT--ATTACATGATTCATGATTAAATA 361545 | | | || |||| |||||||| ||| || | || | || || ||| | | | Sbjct 596372 GATCT---ATATTATTTTTTTTTTTAAA--CATTTTAATAAAATAATCCATAACTCTTTG 596318 Query 361546 ATCTATATCTTCACCACCTAAATGTGTACTACC-GCTAACTGC-TAATGTTCTAAATAAG 361603 ||| | ||||||||| ||||| || ||| |||| ||| ||| || ||| ||||| Sbjct 596317 ATCAAAATCTTCACCTCCTAAGTGAGTATTACCTGCTGT-TGCATAGACTTC-AAATACA 596260 Query 361604 CCATTATTAATATTCATGAGACAAACATCGAGTGTTCCTGCACCTAAATCATATATGATA 361663 ||||||| ||| | | | ||||||| | || || | |||||||| |||| | | Sbjct 596259 CCATTATCTATAACTAAAATAGAAACATCAAAAGTACCACCTCCTAAATCGTATACTAAA 596200 Query 361664 ATATTCCCCCCGTTTTTATTTTTCCAAGTTTTACTTCCAAGACCATAAGCTAATGAAGCA 361723 ||| | | ||| || || ||||| || || |||||||||||| | |||| Sbjct 596199 ATACT-------TGTTTCTTCTT-----TTTTA--TCTAA-ACCATAAGCTAAAGCAGCA 596155 Query 361724 GCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGCTATTTTTGATGCATCTAAA 361783 || || ||||| ||||| || | | ||| | ||| || ||| |||||| Sbjct 596154 GCGGTGGGTTCATTAATAATACGTACTATATTTAATCCAGCAATTGCACCAGCATCTTTT 596095 Query 361784 GTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGTAATCACTGCTTTTT 361838 || ||||| | |||||||||||| ||||||||||| ||||||| || || |||| Sbjct 596094 GTAGCTTGTCTTTGTGCATCATTGAAATATGCAGGTACAGTAACAACAGCATTTT 596040 >seq8 Length=956651 Score = 190 bits (210), Expect = 2e-42 Identities = 970/1523 (64%), Gaps = 63/1523 (4%) Strand=Plus/Minus Query 684247 TCATATCCGAATTCCAAAGACCTAAATCAATTAAATCCTGAACTAAATATTTATTAATGA 684306 ||||||| || |||||||||| ||||| | ||| | | ||||| ||| | | Sbjct 458027 TCATATCTTCATCCCAAAGACCTCTATCAAAAAGATCTTTTAATAAATGGGGATTGACAA 457968 Query 684307 CATAATAATCTCCAGCTAAAGTACTTCTTGAATAAATATTTTCAGTAAAGGGCTCGATGC 684366 || || | || ||| |||| || ||| ||||||| || ||| | || || | | Sbjct 457967 CAAAAAATTCACCACTTAAAACACGTCTATAATAAATGTTACTTGTATATGGTTCAAAGG 457908 Query 684367 ACTCATTGTAACCCATGATTTGAGAAGTACTTGCTGTGGGCATACAAG-TAGTTGTTAAA 684425 | ||||| | || | ||||| ||||| ||||| |||||| | || | | | Sbjct 457907 ATTCATTATTTCCTAAAATTTGTGAAGTTGAAGCTGTTGGCATAGGTGCTAAAAGA-AGA 457849 Query 684426 CTATTTCTAACACCAT--ATTTTTGGATATCTATCATCAAACTATCCCAATCCCACATTC 684483 |||||| | |||| || || || | | | | || |||||||||||| || Sbjct 457848 GAATTTCTTAATCCATGCATACTT--ATTTTTTTTTTTAATAAATCCCAATCCCA-AT-- 457794 Query 684484 CACTTAATTTATCCGAGCTAAGATTCCATAAATCAAATTGGAATTTTCCTTTGGAAAGAG 684543 | ||| ||||| | |||||| | ||||||||| ||| |||||||| | Sbjct 457793 -ATTTA--TTATCTACTTTTGCATTCCACATATCAAATTGTAATATTCCTTTGCTTGCTG 457737 Query 684544 GACTTCCTATAAATGTTTCATAAGCACCAAATTCTTTGGATAATTTCATTGATTCTTCCA 684603 |||| ||| | ||| |||||| | ||| | ||| | ||||| | || ||| | Sbjct 457736 GACTACCTTGATATGATTCATATGGGCCATTTACTTGTGCTAATTCAACCGACATTTCTA 457677 Query 684604 GACAACCAAAATAAATAGTTTCAAATATTTTACGATTGAGATCGCGAGCCAATTCAGAAT 684663 | | || |||| ||||||||||||||| | | ||| | || ||| ||||| | Sbjct 457676 AAGCAGCATAATACATAGTTTCAAATATTCTTCTATTTAATTCTTTAGCTTCCTCAGATT 457617 Query 684664 CAAATGG-TGTTTTAAAAATCGCAAAAA--CATCCGCTACTCCTTGGACACCAACACCAA 684720 || |||| | | |||||| ||| ||| ||| |||| |||||| || || | |||| Sbjct 457616 CATATGGATATCTTAAAA---GCATAAATGTATCTGCTAATCCTTGTACTCCTATTCCAA 457560 Query 684721 TTGGCCTATGTTTAATATTAGATACACGTGTTTTATCAACTGGATAAAAATTAATATCAA 684780 | || |||||| | |||| ||| | || | || ||| ||| |||| | |||| Sbjct 457559 TAGGTCTATGTCTTTTATTTGATTTTTCAGCTTCTTTAATTGGGTAATAATTTCTTTCAA 457500 Query 684781 TAACATTATTAAGATTTCTTGTCATAATTCCTGACACTTTCCGTAACATATCATAATCGA 684840 ||| |||| | |||||| || |||||| | | | ||| | | | ||| | Sbjct 457499 TAATTTTATCTAAATTTCTAGTAATAATTTTAGTAATATCGTATAATTTTTTAAAATTAA 457440 Query 684841 ATTCTGGTACTCCATTTTTATGTATTATGAA--TCTGGGAAGACATATTGATGACAAATT 684898 ||||| ||||| | ||| | || | || || ||||| | | ||| Sbjct 457439 ATTCT-------TTTTTTTCTCTATCAACAAATTTACATAATGCA-ATTGAAGCTAGATT 457388 Query 684899 ACAAGTGGCATATTCATCCGCTGATGAGTATTCTACAATTTCCGAACAAAGATTTGATCC 684958 |||| || |||||| | ||||| ||||| | |||||| |||| | ||| | Sbjct 457387 ACAAACAGCTACTTCATCAGGTGATGTATATTCAATAATTTCACAACATAAATTACTACA 457328 Query 684959 ATTAATAACGCCAACATTAATTTGATTGGACTTATAATTAACAGCATCTTTAAAAACAAT 685018 ||||| || | ||| ||||||| || ||| ||||| ||||||||| | | || Sbjct 457327 TTTAATTGTCCCTAAATTTTTTTGATTAGATTTAGAATTACATGCATCTTTATATAACAT 457268 Query 685019 ATATGGTACTCCGGTTTCAATTTGTGTTTCCATAATTTTAAACCATAAATCACGAGC-AG 685077 ||||||||| || ||||||||||| ||| | || |||||||||||| | || || Sbjct 457267 ATATGGTACACCAGTTTCAATTTGGCTTTGTAATATAGCAAACCATAAATCTTGTGCAAG 457208 Query 685078 A--TATTTGTTT-CATATATTTACCTGATTTTTCATAACTCAAATATGTTTCATTAAATT 685134 | | ||| ||| | || |||| | || |||||| | |||| || | ||||| Sbjct 457207 AACTGTTTTTTTACCTAAATTTTC----TTCTTCATATTTTGTATATAATTTTTCAAATT 457152 Query 685135 CAGTACC---ATATTTACCAACAATATTTGGACATTCAGATGGACACATCAAGGACCATA 685191 | ||| | ||| || | | |||||||||| |||||||| || | ||| Sbjct 457151 CTTCACCCCAAGATT---CACTTAAACCTGGACATTCATTAGGACACATTAAAGTCCAGT 457095 Query 685192 CTCCATCTTCTCGTACTCGCTCAATAAATATATCATTNNNNNNNNNNNCTAAAAACAAAT 685251 | || |||| || | || ||||||| |||| | |||| |||| Sbjct 457094 GTTTATTTTCTTTAACCCTCTTCATAAATAAATCAGGTACCCATATAGCATAAAATAAAT 457035 Query 685252 CTCTGGCTCTTTCAGTTTCCGCTCCTGT-AttttttttAAGATCGAGGAAAAAATAAATA 685310 | | |||| || | | | | | | || ||||||| | | ||| | || | ||||| Sbjct 457034 CACGAGCTC-TTAATTCTTCTTTACCGTGATTTTTTCTTAAATCTAAAAATTCAAAAATA 456976 Query 685311 TCTGCATGCCAAGGTTCAATATAAATAGCAAATGAACCAGCTCTTTT---GCCTCCTTGA 685367 || | ||||| || |||||||| | |||||| ||||| |||||| ||| |||||| Sbjct 456975 TCAGAGTGCCATGGCTCAATATATACAGCAAAAGAACCTTTTCTTTTTCCGCCACCTTGA 456916 Query 685368 TTGGCATACCTCGATATATTATTAAATACAGTTAATACTCG---TAGACCACTTGCTGTG 685424 | |||| || | | ||| |||||| || |||| | | | || ||| ||| | | Sbjct 456915 TCTACATATCTTGCTGTATCATTAAAAACTCTTAACATTGGAACTAACCCATTTGATATA 456856 Query 685425 CCTTGTGTAGAATTAATATAAGATCCATCCGCCCTAATATTTGAAACATTTACACCAATT 685484 || | || |||||||||| | | | ||||| | ||| ||||| || Sbjct 456855 CCATTAGTTCCTCTAATATAAGAATTTTGTCCTCGAATATCTTGTACAGCAACACCTATA 456796 Query 685485 CCACCAGCATATTTACTAATCATAGCACAATCTTTCCAACAATCACCAATTGCTCCCAT- 685543 || || || |||||| |||| ||||| | || | ||| || || | || Sbjct 456795 CCTCCTGCTGTTTTACTGATCAATGCACATTGCTTTAATGTTTCAAATATACCTTCTATT 456736 Query 685544 --ATCATCTTTTATTCCTAAAAGGAAACAGCTTGATAATT--GTTCATGAGTAGTTCCAG 685599 |||| ||| ||| ||| | ||||| || | || | || || || ||||| | Sbjct 456735 GAATCAGATTTCATTGATAATAAAAAACATGAAGACATTTGGGGTCTTG-GT-GTTCCCG 456678 Query 685600 CATTAAATAATGTTGGTGTTGCATGAGTAAAATAACCCTGTGACAACATTTCATAAGTTT 685659 |||||||||||| || || |||||||||||||| || |||| | | ||||||| Sbjct 456677 AATTAAATAATGTAGGAGTAGCATGAGTAAAATATTTTTGAGACATTAAATGGTAAGTTT 456618 Query 685660 CAAATATTCTGTTTAGATCATTATTACGATAATGTATAGCAATTGCTACACGCATAAATA 685719 | | | || || ||| ||| | | |||||| | || | ||| | ||| |||| Sbjct 456617 CTA--AAGCTTTT----TCAATATCATCAATATGTATTCCTATAGATACTCTCATTAATA 456564 Query 685720 AATGTTGAGGTCTTTCTATGATT 685742 |||||||||| | ||| || ||| Sbjct 456563 AATGTTGAGGACGTTCAATAATT 456541 Score = 149 bits (164), Expect = 5e-30 Identities = 145/184 (79%), Gaps = 2/184 (1%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 ||||| ||||||| || |||||| |||||| | ||||||||| |||||||| | |||| Sbjct 415466 ATATTATAATCAGATAATGTTCTTCCATCTTCTAATTGTTTTCCAGCAAAAATTAATCTT 415407 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||||||||| || || ||||||||||||||||||||| ||| || ||||| ||| Sbjct 415406 TGCTGATCAGGTGGGATACCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATAGTA 415347 Query 563413 TCAG-TGTGAGTACATTCGAGAGTAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTG 563471 |||| || ||| || ||||| | ||||| || || | ||||| ||||||||||| Sbjct 415346 TCAGATGGTTCGACA-TCAAGAGTGATTGTTTTTCCTGTTAATGTTTTTACGAAAATTTG 415288 Query 563472 CATA 563475 |||| Sbjct 415287 CATA 415284 Score = 116 bits (128), Expect = 3e-20 Identities = 100/124 (81%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 563293 ATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTT 563352 || || || |||| || ||||| |||||| | ||||||||| |||||||| | |||| Sbjct 414840 ATGTTATAGTCAGATAATGTTCTGCCATCTTCTAATTGTTTTCCAGCAAAAATTAATCTT 414781 Query 563353 TGCTGATCAGGAGGAATTCCTTCTTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTA 563412 ||||||||||| ||||| ||||||||||||||||||||| ||| || ||||| ||| Sbjct 414780 TGCTGATCAGGTGGAATACCTTCTTTATCTTGAATTTTTGCTTTAACATTTTCAATAGTA 414721 Query 563413 TCAG 563416 |||| Sbjct 414720 TCAG 414717 >seq4 Length=1653377 Score = 168 bits (186), Expect = 5e-36 Identities = 405/603 (67%), Gaps = 15/603 (2%) Strand=Plus/Minus Query 428095 TGAATAACCGGTTCCAATTCCTTCTGTACCATTTACAAGAATCATTGGAATGACTGGTGC 428154 ||||||||| ||||| || ||||| |||||||| ||||| | ||||| ||||| Sbjct 590072 TGAATAACCAGTTCCTATACCTTCACACCCATTTACTAGAATTGTAGGAATAACTGGCAT 590013 Query 428155 ATAATATTGTGGTTCAATCATTTTATTATCTTCATATTGTAAATGTAAAATATCAAAATC 428214 ||||||||||||||| || ||| ||||||| | | | |||||| | ||| Sbjct 590012 ATAATATTGTGGTTCTATTTTTTGTCCTTCTTCATTTAAATATTTTAAAATTGGATCATC 589953 Query 428215 ATGCTCGATAAATAtttttttAGCCAATTCATCAAGTTGTGTAAAGATATATCTTGCGCT 428274 | || ||||||| || ||| || |||||| |||||| ||||| || || Sbjct 589952 AAATTCATTAAATATACTTCTAGTAGATGATGCAAGTTTTGTAAATATATACCTAGCCGC 589893 Query 428275 TGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGTCCATTAGGCATCAATAAATT 428334 | | ||||||||| ||| ||||| | |||||||||||| || || ||||| Sbjct 589892 AGATGCATCTTTACCACCTTCTTTTCTACTACCAAATTGTCCACATGGTTCTAAAAAATT 589833 Query 428335 AATATTATTACTTCCCACATAATTTTGGGCCATATTAACAATGGTACTAGTTA-AG-GAT 428392 ||||| || || ||| | |||| |||||||| | ||| || | ||| || ||| Sbjct 589832 TATATTGTTTGACCCAACAAATGTTTGAGCCATATTTATAATAGT--TTGTTGTAGTGAT 589775 Query 428393 TGTTCACCATGATGATATTTAGTTCTTTTTGAAACTGCACCTTGTAATTCTGATACCTTT 428452 |||||||||||| ||| | | || || || |||| | || || || || Sbjct 589774 GATTCACCATGATGGTATGCACTATGTTCTGCAATATAACCTACAAGTTGTGCAACTTTA 589715 Query 428453 ATTTCTTCTTTATAAATACCTTCTTCTACTGATCCATAAAATACTTTGCGTTGTGATGGT 428512 ||| | || ||||| ||| | || | ||||| || ||||| | |||| ||| Sbjct 589714 CATTCGT-TTCGTAAATTTCTTTTAAAAC--AACCATATAAAACTTTTCTTTGTCCAGGT 589658 Query 428513 TTGAATCCATCCATAATATTAGGTATAGATCTTAAATTATCATCCACTGAGAAT--GATA 428570 || |||||||||||||||| |||||| |||| |||||| | ||||| ||| Sbjct 589657 TTCCATCCATCCATAATATTGGGTATACTTCTTTCTGTATCAT--ATCTAGAATAATATA 589600 Query 428571 TTAGTTCTTGATGAATGAAATCATAATATGATACTCGTTTTTGTGCATTATCAATGTAAT 428630 ||| ||||| || | |||||||||||||||| ||||| | || ||||| || Sbjct 589599 TTAATTCTTTATTTACAAAATCATAATATGATAAATCTTTTTCTTTATGATCAACATA-- 589542 Query 428631 TGTTGGGATTAT--AAGTATTTACCCATATTTTTCGATCATTTTCTCtttttttATCAAA 428688 || | ||| || | | || ||||| ||| ||||| | |||||||||| ||| Sbjct 589541 TGAGCCTAATATAAAATTTTGTAGCCATAATTTACGATCTTCAATTCTTTTTTTACTAAA 589482 Query 428689 AGC 428691 ||| Sbjct 589481 AGC 589479 Score = 125 bits (138), Expect = 6e-23 Identities = 237/345 (69%), Gaps = 4/345 (1%) Strand=Plus/Plus Query 390811 ATACCATTATCACCATATACACATTGAATTAATTTGTCATTGGCATTTCTTACGGTACCA 390870 || |||| |||||||||| | ||||||| | | ||| | |||||| || || | | Sbjct 307964 ATTCCATCTTCACCATATAAAAATTGAATAATATCACCATATGAATTTCTCACTGTTCTA 308023 Query 390871 TCATACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGTG 390930 ||||||| ||| ||| || || | ||||| |||| ||||||| ||||||||||| Sbjct 308024 TCATACTGTACCATAACATCCTCCATAGCTTTAATTAATCTTCTTTGTATATAACCAGTT 308083 Query 390931 TCTGCAGTTTTAATTGCAGTATTAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAAA 390990 |||| |||||| ||||||| ||||||||||||||| ||| ||||| | || || || Sbjct 308084 TCTGATGTTTTACAAGCAGTATCAATAATACCTTCTCTACCTCCCATAGCATGAAAAAAG 308143 Query 390991 AATTCCATAGGATTGAGTCCA--GAAATAAATGATCCAAAACAAAATCCTCTTGCAGAAG 391048 | ||| || | || ||| |||| || || | | || ||||||||| | Sbjct 308144 ACTTCTTGTGGTGTTAGCCCACTTAAAT-AAGAATTCGACAC-AAATCCTCTACTTTCGG 308201 Query 391049 GACTATCATCATGTTGTGCAAACATAGGTAATGTTCTATTATTAAATCTTTTTTGAATTC 391108 | | || |||| || ||| ||||||| ||||| |||||||| | |||||| Sbjct 308202 GCCCATAATCAAATTTAATAAAATGTGGTAATGATCTATGATTAAATCCAAATGGAATTC 308261 Query 391109 GTTTATCTTCGACAATAACTTGTCCAATACATCCTGCAATCTGTG 391153 ||| |||| ||| | ||| || | |||| | ||| |||| Sbjct 308262 TTTTCCCTTCCACATTTTGTTGACCCACACATGATATAATTTGTG 308306 Score = 111 bits (122), Expect = 1e-18 Identities = 213/314 (68%), Gaps = 15/314 (5%) Strand=Plus/Minus Query 430244 ATATTCGCTAATTTTGCTCCGAATCCATTTTTACCACCAACAAtttttttttCACCTTTA 430303 || || | || ||| |||||||| ||||| |||||| ||| | | |||| | | | Sbjct 587863 ATGTTTGTTAGTTTAGCTCCGAAACCATTACGACCACCCGTTATTCTGTCTTCAGCATCA 587804 Query 430304 TCATAATTAGTGGATGTTAATAGTTCTCCAAAAATCATCGATGGTACCATGATTTTATGT 430363 ||||||||| ||||||||||| ||| ||||||||||| ||||| || || | Sbjct 587803 TCATAATTATCGGATGTTAATAATTCACCAAAAATCATATGAGGTACATATATATTCATT 587744 Query 430364 TCTTTATGCTCGACGACATCAATACCATCACCATTATTCCAAACACTAATTTCTCCAGAT 430423 |||||||| | || ||||| || |||| ||| | ||||| |||| | | Sbjct 587743 TCTTTATGTATTTCTACTGGTATACCTTCTCCATCATTATATACACTTATTTTTTTTTGT 587684 Query 430424 TCTTCATTGATGTCGACTTTTAT-CATATTACATGATTTGCA------TCTTTTAC---- 430472 |||| ||| || |||| |||||| || | | | | ||| || |||||| | Sbjct 587683 TCTTTATTTATTTCGATTTTTATACAAGTCATAGGGTTTTCACTTTTTTCTTTTTCTCGA 587624 Query 430473 ----TATGATCCGCTGAATTTACAAGAACTTCATCATATATTTTATAAAGTCCTGGTACA 430528 | ||| |||| || |||| || ||||||| |||||||||| | ||||||||| Sbjct 587623 GCTTTTACATCAGCTGCGTTAACAATAATTTCATCAAATATTTTATATAACCCTGGTACA 587564 Query 430529 TAAGATATTTCTTT 430542 |||| ||| | ||| Sbjct 587563 TAAGTTATATTTTT 587550 Score = 95.1 bits (104), Expect = 1e-13 Identities = 175/255 (69%), Gaps = 4/255 (2%) Strand=Plus/Plus Query 394014 TTTCATCAAATGTTAAATTCATTGCAATAATTTGTGGTAGTCCCACTTCATTAAGAGCAA 394073 ||||| ||||||||| |||| |||| | || |||| || | | | | | | | Sbjct 309696 TTTCACAAAATGTTAATGTCATAGCAACAGATTTAGGTACCCCTATATAGTCTATACCTA 309755 Query 394074 TATTTGGATCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCCCATAAGAT 394133 ||| ||||| ||||||||||| | | |||| | || || | ||| ||||| | || Sbjct 309756 AATTAGGATCACCAGTAATAACTGTTCTAGCTGAAAAGTCAACTCTTTTACCCATTAAAT 309815 Query 394134 TTCCACGAATTCTACCTTCTTTACCTCGTAATCGTGACGACAAATCTTTTGTTAAttttt 394193 |||| | | |||||||||||||||| |||| || | | ||||| || ||||| Sbjct 309816 TTCCTCTTAATCTACCTTCTTTACCTTTCAATCTTGTTCTTATAGCTTTTATTGGTTTTT 309875 Query 394194 t--atttttttGCTGTGATCTTGGTAATCCTGATATATCGTTCGCAAAAAATGTTGCAAC 394251 | || | ||| || | |||| | |||| |||||| || |||| ||||||| || Sbjct 309876 TAGATCTAGTTGTTGCAA--TTGGCATACCTGGTATATCATTATCAAATAATGTTGTAAT 309933 Query 394252 ATGATATTGTAATAA 394266 |||| | |||||||| Sbjct 309934 ATGAAACTGTAATAA 309948 >seq6 Length=1590816 Score = 143 bits (158), Expect = 2e-28 Identities = 271/398 (68%), Gaps = 12/398 (3%) Strand=Plus/Plus Query 552202 AAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTT 552261 ||||||||||||| ||||| || || || | ||||| || || |||| | | | | Sbjct 1036444 AAAGTGTTAATCCTGATGAAGCAGTAGCATTAGGTGCTGCTATACAAGGTGGTGTATT-- 1036501 Query 552262 CTGGACAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTC 552321 ||| || |||| || || || | || | ||||||||| ||| ||||| Sbjct 1036502 ------AAAAGGA-GAAA---TAAAAGATTTATTATTATTAGATGTTATACCTTTATCTT 1036551 Query 552322 TTGGTTTAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTC 552381 | ||| | ||||| | || ||| || | || || | || |||||||||| ||||||| Sbjct 1036552 TAGGTATTGAAACCTTAGGTGGTGTTTTTACAAAATTAATTAATAGAAATACAACTATTC 1036611 Query 552382 CTTGTAAAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTC 552441 | |||||||||| |||||||| || |||||||||||||| || | || Sbjct 1036612 CAACCAAAAAATCTCAAGTATTTTCAACTGCAGCAGATAATCAAACTCAAGTCAGTATCA 1036671 Query 552442 AAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATT 552501 || | ||| ||||||||||| || | | || ||||| || ||| | ||| ||| Sbjct 1036672 AAGTATTTCAAGGAGAAAGAGAAATGGCCTGTGACAATAAAATGCTAGGTTCATTTGATT 1036731 Query 552502 TAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCG 552561 | | ||||| || || || || | || || || ||||||||||| || || ||| | | Sbjct 1036732 TGGTTGGTATACCACCAGCCCCAAGAGGTGTTCCACAAATTGAAGTCACATTTGATGTTG 1036791 Query 552562 ATGCCAATGGAATTTTGAATGTGACTGCTTGTGATAAA 552599 |||| |||| |||| | ||| | | ||| ||||||| Sbjct 1036792 ATGCAAATGCAATTATTAATATTTCAGCTATTGATAAA 1036829 Score = 111 bits (122), Expect = 1e-18 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 361705 ACCATAAGCTAATGAAGCAGCTGTTGGTTCGTTAATTATTTTAATAACATTGAGTCCCGC 361764 |||| ||||||| | ||| || |||||||| ||||| ||| | | ||||| || || || Sbjct 1035911 ACCAAAAGCTAAAGCAGCTGCAGTTGGTTCATTAATAATTCTTAAAACATCTAGACCTGC 1035852 Query 361765 TATTTTTGATGCATCTAAAGTGGCTTGACGTTGTGCATCATTAAAATATGCAGGAACAGT 361824 ||||| |||||| || ||||| | ||||| |||||||||||||||||| ||||| Sbjct 1035851 AATTTTACCAGCATCTTTTGTTGCTTGCCTTTGTGAATCATTAAAATATGCAGGCACAGT 1035792 Query 361825 AATCACTGCTT 361835 ||| ||||||| Sbjct 1035791 AATAACTGCTT 1035781 Score = 102 bits (112), Expect = 7e-16 Identities = 92/116 (79%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 550400 GCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACTAAAGATGCT 550459 ||||| || ||||| || |||||||||||||| |||||| | ||||| || ||||||||| Sbjct 1035783 GCAGTTATTACTGTGCCTGCATATTTTAATGATTCACAAAGGCAAGCAACAAAAGATGCT 1035842 Query 550460 GGACGTATTGCTGGACTTAATGTTCTTCGTATTATCAATGAACCTACTGCTGCTGC 550515 || ||||| || || ||||| | | ||||| |||||||| ||||| ||||| Sbjct 1035843 GGTAAAATTGCAGGTCTAGATGTTTTAAGAATTATTAATGAACCAACTGCAGCTGC 1035898 >seq2 Length=2392314 Score = 143 bits (158), Expect = 2e-28 Identities = 127/156 (81%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 930664 TTGATTTTTCTTCACCAAATATTGCCAAAGAAATGCATATTGGACATTTGCGTTCTACCA 930723 ||||||||||||||||||||||||| |||||||||||| |||| ||||| | || |||| Sbjct 1174182 TTGATTTTTCTTCACCAAATATTGCAAAAGAAATGCATGTTGGCCATTTAAGATCAACCA 1174241 Query 930724 TTATTGGAGAATCTTTATGTAGATTATATGAATATTGTGGAAGT-AAAGTTCATCGAGTC 930782 | | ||||| || | | | | ||| ||||| || | |||| ||| ||| ||||| Sbjct 1174242 TATTAGGAGATACTATTTCCAAAGTATTTGAAT-TTTTAAAAGTAAAAACACATAGAGTC 1174300 Query 930783 AATCATATTGGTGATTGGGGAACACAATTTGGTATG 930818 |||||| ||||||||||||||||||||||||||||| Sbjct 1174301 AATCATGTTGGTGATTGGGGAACACAATTTGGTATG 1174336 >seq5 Length=1684710 Score = 140 bits (154), Expect = 3e-27 Identities = 159/211 (75%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 563265 TACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTC 563324 ||| | ||| | ||| |||||| ||| || || |||| || |||||| |||||| Sbjct 156745 TACCAAATGTAAGGTTGATTCTTTTTGAATGTTATAGTCAGATAAAGTTCTGCCATCTTC 156686 Query 563325 AAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCTTTATCTTG 563384 | ||||||||| |||||||| | |||||| |||||||| |||||||||||||||||||| Sbjct 156685 TAATTGTTTTCCAGCAAAAATTAATCTTTGTTGATCAGGGGGAATTCCTTCTTTATCTTG 156626 Query 563385 AATTTTTTGTTTTACTGCCTCAATTGTATCAG-TGTGAGTACATTCGAGAGTAACAGTTT 563443 |||||| ||| || ||||||||||| | || ||| || ||||||| |||| Sbjct 156625 GATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCAACA-TCAAGAGTAATTGTTT 156567 Query 563444 TACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | || || | ||||| || || |||||||| Sbjct 156566 TTCCGGTTAATGTTTTTACAAAGATTTGCAT 156536 >seq10 Length=766960 Score = 129 bits (142), Expect = 5e-24 Identities = 346/512 (68%), Gaps = 28/512 (5%) Strand=Plus/Minus Query 434560 ttttttGTGTGTATTTCAAAAATTTTAACACGACCAGATTTATTTGGAAGATCA-ATTTT 434618 |||||||| || || | || |||| || | ||| ||||||||| | || | |||| Sbjct 711431 TTTTTTGTATGAATATTTAATATTTGAATTCTACCTTCTTTATTTGGTA-ATGATATTTC 711373 Query 434619 AATATGAACACCAAATCTCCCCGAACG-AATAACTGCAGGATCTAATAATTCTAATCTAT 434677 |||||| | ||||||| || | | ||||| ||| ||| | ||| |||| ||||| Sbjct 711372 AATATGTAATTCAAATCTACCTGGTCTTAATAA-TGCTTCATCAATTAAATCTATTCTAT 711314 Query 434678 TGGTTATTCCAATGCAAATAAAATTATT-AAATTGTTCTAATCCATCCATTTCTGCTAAA 434736 | || |||||||| | | | |||||| ||| | || || |||||| |||| || ||| Sbjct 711313 TTGTCATTCCAATTAATAGTATATTATTTAAACTATT-TACTCCATCTATTTTTGATAAT 711255 Query 434737 AATTGATTAACAACAGAATCTCTTAC---TGG---ACTAGA---ACTACTACCTTCTCGT 434787 ||||| ||||| | | ||| |||| || |||||| | ||||||| | || Sbjct 711254 AATTGGTTAACTATACTATCATTTACACCTGTCCCACTAGATGCAGAACTACCTCTTTGT 711195 Query 434788 ACTGGTAACATTGCATCAATTTCATCAATAACAACCATATATGTAGG--TGATTTATCAC 434845 | | |||||||| || ||||| ||| | ||||||| ||| || |||| Sbjct 711194 C---GACAAATTGCATCTATCTCATC--TAATATTATAATATGTAATAATGAATTTTCAC 711140 Query 434846 CGTACTTTTTCCAAGCATCTTTGGCAGGTTTAAATATGTCGCGAACATTAGATTCAGATT 434905 | | | ||| | | || || |||||||| | |||| ||| |||||||| Sbjct 711139 CAGATTGTTTATATTCCAATTCAGCCTCTTTAAATAAATTACGAATATTTTCTTCAGATT 711080 Query 434906 GTCCAACCCATTTATTAAATATTTCCGGACCAGACATTAATCTAAATTGATCTCCATGAC 434965 | || || ||||||| |||||||| || ||| || | | || || ||| || | Sbjct 711079 GACCTACATATTTATTTAATATTTCAGGCCCATTTATAATTTTAGGTTC-TCT---TG-C 711025 Query 434966 ATCCTAATATATCACCTAAATTACGAGCGATAGTTGTTTTACCAGTACCAGGAGGTCCAT 435025 || |||| | | ||||| | | ||| || ||||||||||||||||||||| |||| Sbjct 711024 ATT-TAATGTTTTACCTATTTGTCTAGCTATTAATGTTTTACCAGTACCAGGAGGACCAT 710966 Query 435026 AAAATATAATACCTTTTACTGGTTTTAATCCT 435057 | ||||| ||||| || || | |||| |||| Sbjct 710965 ATAATATCATACCCTTCACATGCTTTATTCCT 710934 Score = 91.5 bits (100), Expect = 1e-12 Identities = 216/323 (67%), Gaps = 20/323 (6%) Strand=Plus/Plus Query 437329 TGGAATTCATATTCATTGGGAGCAAAACGCATATATTTGTAACTACCATGTATTTCATCA 437388 |||||||| | |||| || || | | | |||| ||| | |||| ||||||||| Sbjct 497701 TGGAATTCTTCGGCATTTGGTGCTTTATGAAAATATAAGTATCCACCAAATATTTCATCG 497760 Query 437389 GATCCTTCTCCAGAAAGTAATACTCGAATATTAGTATGGTCA---TGTATATATTTTGCC 437445 |||||||| ||| ||| || || ||| || | | | ||| | ||| Sbjct 497761 GATCCTTCACCACT---TAAAACC---ATTTTAATACAGCTACTTTTTATTAACCTTGAA 497814 Query 437446 ATAATATATTGTGGAGTAGATGCACGAATTGTTGTAATATCATATGTTTCAATAGTATTT 437505 | |||||| || ||||||||||||| ||||| ||||||||||||||||| || | Sbjct 497815 AGAATATACATAGGTGTAGATGCACGAACCGTTGTTATATCATATGTTTCAATGTGATAT 497874 Query 437506 ATCACTTCGGGAATAATTTTAATTCCCTGTTCAACAGAAAAAGGAA---CTATATGAT-G 437561 || || || | | | | ||| || || ||||| | |||| ||| || |||||| Sbjct 497875 ATAACATCATGTAATACATCAATACCTTGATCAACTGTAAAATGAAATTCTGTATGATCA 497934 Query 437562 TTGTGTAATGCCAAGATATTCCACAACTTTTTTGGCAGCTTCAACATCTGGACTACCTGG 437621 ||| ||| | | || |||||| ||| || |||| | ||| ||| |||| Sbjct 497935 GTGTTTAA-------AAAATCGGCAACTTCTTTAGCTGCTTTTAAATCAGGAGAACCTTT 497987 Query 437622 TAATCCAATAGAAAAACATGTTA 437644 ||||||||||||||||| | ||| Sbjct 497988 TAATCCAATAGAAAAACTTTTTA 498010 >seq1 Length=2470179 Score = 127 bits (140), Expect = 2e-23 Identities = 331/490 (68%), Gaps = 20/490 (4%) Strand=Plus/Minus Query 367267 GATGGACCTCCATTTGCCACAGG--TACAATGCATTATGGTCATATTTTAGTATCATCTA 367324 ||||| || |||||||| || || ||| | |||||||| ||| | |||| | | Sbjct 1833843 GATGGGCCACCATTTGCTACTGGATTACCA--CATTATGGACATTTATTAGCAGGTATAA 1833786 Query 367325 TTAAAGACACCATAATTAGATATTTTACCATGAAG--GGTTACAAAGTTGATAGAAGAAA 367382 | ||||| | | |||||||||| || || || || ||| || ||| | Sbjct 1833785 TAAAAGATTGTGTGACTAGATATTTTT--ATCAATCTGGCTATTCAGTAGAAAGACGCTT 1833728 Query 367383 TTCTTGGGATTGTCATGGAGTTCCAATTGAA-ATGT--TAGCTAAA-AAAGTAATCGGAT 367438 | |||||||||||||||| | || | ||| ||| ||| ||| ||| |||| || Sbjct 1833727 TGGTTGGGATTGTCATGGATTACCTGTCGAATATGAAATAGAGAAAGAAAATAAT---AT 1833671 Query 367439 ACACAACAAAGAAAGAATTATATGATTATGGAATTA-ATAATCATAATGATATTTGTCGT 367497 |||| |||||| || ||| | | |||| | || || ||||||| | ||| | Sbjct 1833670 TAACAAAAAAGAA-GATATAT-TAAAAATGGGAATAGATGCATATAATGAAAAATGTAGA 1833613 Query 367498 AATTTGGTTTTAAAATGTGCTGATCGCTGGTATCAAGATT-TTGAACGTATTGGAAGATG 367556 | | | |||||||||| | || || ||| | || | ||||| | ||||||||||| Sbjct 1833612 AGTATAGTTTTAAAATATTCTAATGAATGGG-TAAATACAGTTGAAAGAATTGGAAGATG 1833554 Query 367557 GATTGACGTAAAAAATGAATATAAAACAATGGATACTAATTTCATGGAATCTGTTATTTG 367616 |||||| | ||||||| |||||||| ||||||| ||||| |||||| |||| || Sbjct 1833553 GATTGATTTTGAAAATGATTATAAAACTATGGATAAAAATTTTATGGAAAGTGTTTGGTG 1833494 Query 367617 GGCATTTAAACAATTATACGAACGCGGTATGATTTTTGAAGGTTATAAAGTAATGCCATA 367676 | ||||| |||||||| || | |||| | || | |||||| |||||||| Sbjct 1833493 GATATTTAGTCAATTATATAAAAAAAATTATATTTATAAATCATTTAAAGTTATGCCATA 1833434 Query 367677 TTCAACTGGTTGTAATACTGCTTTGTCACATTTTGAAGCCAAACAAAATTATCGAGAAGT 367736 |||| | |||||||| || | ||| |||||||| || ||||||| ||| || Sbjct 1833433 TTCATGTAAATGTAATACACCTATATCAAATTTTGAATTAAATTTAAATTATAAAGATGT 1833374 Query 367737 AGTTGATCCA 367746 ||||||| Sbjct 1833373 CTCTGATCCA 1833364 Score = 100 bits (110), Expect = 2e-15 Identities = 425/660 (64%), Gaps = 61/660 (9%) Strand=Plus/Minus Query 368502 GTTAAATAATAATTCTAAAATAAATTGGATGCCATCTAATATT--GGAACAAAACATTTT 368559 |||||| |||||| || || | ||||||| || | || || |||| |||| || Sbjct 1832454 GTTAAA-AATAATGATACAACATATTGGATACCTGCACATGTTAAGGAAAAAAAA--TTC 1832398 Query 368560 GATAATTGGCTCCAAAATTCAGTTGATTGGTGTATTTCAAGAAGTAGGTTTTGGGGAACT 368619 |||||||| | || || | ||||||||||| || | ||| | ||||||||| Sbjct 1832397 CATAATTGGATTAAAGATGCTAAAGATTGGTGTATAAGTAGGAATAGATATTGGGGAACC 1832338 Query 368620 CCAATTCCAGTATGGAAATCTGATGATGGTGAAGAAATTGTTTGTATAGGTTCAATTAAA 368679 ||||||||| |||||| | ||| | ||| |||| ||||| |||| || ||| Sbjct 1832337 CCAATTCCAATATGGACAGATGAAAAAATGGAACAAATAGTTTGCATAGAAAGTATAAAA 1832278 Query 368680 GAATTGCAAGAATTATCTGGTGTGCAAAATATTAGTGATTTACATATTGATAAAATTGAT 368739 |||| || || | |||||| ||||| | ||||||||||| |||| |||||| Sbjct 1832277 CAATTAGAAAAACTTAGTGGTGTTACTAATATCACTGATTTACATAGACATAATATTGAT 1832218 Query 368740 CACATTAAAATT--CCATCAAAGAAAGGAAAAGGTTT-----ATTGTCTCGAGTTGAAGG 368792 || || | ||| ||| || | | |||| | | ||| || | | Sbjct 1832217 CATATAACTATTGATGATCCTAG-AGGTAAAAATTATCCAAAATTAAAAAGAATATCTGA 1832159 Query 368793 AGTTTTGGATTGCTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATACATTATCCATT 368852 |||||| ||||| |||||||| ||||||||||| |||| | | | || | ||||| Sbjct 1832158 AGTTTTTGATTGTTGGTTTGAGAGTGGTTCTATGCCATATGCTAAGGTGCACTTCCCATT 1832099 Query 368853 T---------GATAACGCAAAAT---ACTTTGATAATGATAAAG---------------- 368884 | |||| || || | | | |||| | ||||| Sbjct 1832098 TTATTGCTCCGATATTGCCAATTCCGAAATAGATATTTCTAAAGTCCCAATGGAGAGTTT 1832039 Query 368885 ------ATTATGT--GGCTGATTTTGTAACAGAATCAATTGATCAAACACGTGGTTGGTT 368936 | ||| | ||||||||| | ||||| | ||||||||| | |||||||| Sbjct 1832038 TAATAAAATATTTCCAGCTGATTTTATTGCAGAAGGGTTAGATCAAACAAGAGGTTGGTT 1831979 Query 368937 TTATACCCTATTAG-TATTATCCACAGCTATTTTCGATAAACCGGCTTTTAAAAATGTAA 368995 ||||| | ||| ||||| ||| |||| ||||| | | | ||||||| ||| Sbjct 1831978 CTATACTTTGCTAGTTATTA-GTACATTACTTTTTGATAAGGCACCATATAAAAATTTAA 1831920 Query 368996 -TAGTAACTG-GTATTGTTAATGCATCTGATGGTCAAAAGAT--GTCAAAAAGTAAGGGT 369051 | ||||| | || | ||| |||||||||||| |||| || || ||| | ||| Sbjct 1831919 TTTGTAACGGTTTAATATTA--GCATCTGATGGTAAAAAAATGAGTAAAAGATTAA--AA 1831864 Query 369052 AATTATTCCGATCCTAATAT-TTTAATTGATAAATTTGGTGCTGATACTTTGAGATTATA 369110 |||||| ||||||| ||||| | || | |||||| ||| || |||| |||| | ||||| Sbjct 1831863 AATTATCCCGATCC-AATATATATATTAAATAAATATGGAGCAGATAGTTTGCGTTTATA 1831805 Score = 86.0 bits (94), Expect = 5e-11 Identities = 202/297 (68%), Gaps = 26/297 (9%) Strand=Plus/Plus Query 397049 TATTAGAATTAAATGCATCAAATGAACGTGGTATTGAAACTGT---TAGAACTAAAATTA 397105 |||||||||||||||||||| |||| | ||||| |||||| | || |||| | Sbjct 1036778 TATTAGAATTAAATGCATCAGATGACAGAGGTAT---AACTGTGGTTCGAGAGCAAATAA 1036834 Query 397106 AAA-ATTT--TGTATCAAGTAAAAATACTATATT-TTTGCCAATGGAATTAAGAAACATA 397161 ||| |||| || ||||| |||| | |||| | |||| || ||| ||| Sbjct 1036835 AAACATTTGCTGAATCAA--AAAATCATTATAATATTTGTGAAAGGA---------CATC 1036883 Query 397162 TTTAAA-CTAGTAATATTAGATGAAATTGATTCCATGACAGTAGAAGCTCAAGGAATGTT 397220 |||||| || | |||||||||||| |||| ||||| | || ||| |||| | Sbjct 1036884 TTTAAAACTGATTATATTAGATGAAGCTGATCATATGACCTTTCCTGCACAA--AATGCT 1036941 Query 397221 AAGACAA--ACTATTGAGAAAAATAGCAAAACTACACGTTTTTGCTTGATATGTAATGAC 397278 | || || | ||| || || || ||||| | ||||||||||| ||||| ||| | Sbjct 1036942 ATGAGAAGAATTATGGAAAATTATGCCAAAAATGTCCGTTTTTGCTTAATATGCAATTAT 1037001 Query 397279 ATAGATAAAATAAATTTAGCTTTACAGTCAAGATGTTCACTTTTTAGATTTTCACCA 397335 | ||||||| | |||| |||| |||||||| || ||| ||||||| ||| Sbjct 1037002 GTTAATAAAATTACACCAGCTATACAATCAAGATGCACATCATTTCGATTTTCTCCA 1037058 Score = 86.0 bits (94), Expect = 5e-11 Identities = 141/198 (71%), Gaps = 4/198 (2%) Strand=Plus/Plus Query 390815 CATTATCACCATATACACATTGAATTAATTTGTCATTGGCATT-TCTTACGGTACCATCA 390873 ||| ||| ||||||| | |||| || ||||||| | ||| ||| || | | |||| Sbjct 1719365 CATCATCTCCATATATAAATTGTAT-AATTTGTTTATCACATGATCTAACCGAATAATCA 1719423 Query 390874 TACTCTACTTTAATGTCTTCTAACATTTTAACTAATTTTCTTTGGATATAACCAGTGTCT 390933 || | || | || |||||| ||| | | | ||||||| ||||||||||| || Sbjct 1719424 TAATGTATAGATAAATCCTCTAACGCTTTCATAAGTCTTCTTTGCATATAACCAGTTTCA 1719483 Query 390934 GCAGTTTTAATTGCAGTAT-TAATAATACCTTCTCTTCCTGCCATAACTTGGAAGAAAAA 390992 |||||||| | || |||| || |||| ||||||||||||| ||| || || ||||| Sbjct 1719484 GCAGTTTTGACAGCTGTATCTACTAAT-CCTTCTCTTCCTGACATTGTATGAAAAAAAAA 1719542 Query 390993 TTCCATAGGATTGAGTCC 391010 ||| | ||||| | ||| Sbjct 1719543 TTCGGTTGGATTTAATCC 1719560 >seq3 Length=1704331 Score = 125 bits (138), Expect = 6e-23 Identities = 395/605 (65%), Gaps = 43/605 (7%) Strand=Plus/Minus Query 1047046 ATTGCTGATTGGTTTGCACAAATGAATCATAAAATGGGAGGTGATTTAGAAAAAATTAGA 1047105 |||| ||||||||| || ||| | ||| |||||||| || |||||| | ||||| | | Sbjct 858674 ATTGGTGATTGGTTCGCTCAACTTAATAATAAAATGTCTGGAGATTTAAATAAAATAAAA 858615 Query 1047106 GATGTGGGTAAATATTTCATTGAAGTATTTAAAGCATGTGGTATTAATATGTCTGGCACT 1047165 | || || ||||||| |||||||||| ||| |||||||| ||||| | Sbjct 858614 AAGGTTGGACAATATTTTATTGAAGTATGGAAAAGTTGTGGTATGGATATGGAAAATGTT 858555 Query 1047166 AAATTTATCTGGGCTAGTGAATTTTTTAATGATAATGCTACAAAATATTTTGAAAGAATG 1047225 ||||||| ||||||||||| | ||| | || | ||||||| | | | Sbjct 858554 CAATTTATGTGGGCTAGTGACGAAATAAATAAAAACCCGGATAAATATTGGTCCACAGT- 858496 Query 1047226 TTACATATTGCTA-ATCAGACATCTTTAGCA-----CGTGCTAAAAGATGTTGTCAAATT 1047279 ||||| || |||| | |||| | || ||||||||||| || Sbjct 858495 -----TATTGATATATCAAGAAGTTTTAATATTAATCGAATTAAAAGATGTTTAACTATA 858441 Query 1047280 ATGGGACGTAGAGAAGGTGATG--AATTATCTTCGTCACAAATTATATATCCTTGTATGC 1047337 |||||||| | ||||| || | ||||| || || |||||| ||||||| ||||||| Sbjct 858440 ATGGGACGAACTGAAGGAGAAGATAATTA--TTGTTCTCAAATTTTATATCCATGTATGC 858383 Query 1047338 AAGTAGCAGATATTTTTGAATTAAATCCAAATGGAATTGATATTTGTCAACTTGGTGTTG 1047397 || |||||||| || |||||| | |||||||| ||| | || | Sbjct 858382 AATGTGCAGATATATTCTTTTTAAAT---------GTCGATATTTGCCAATTAGGGACAG 858332 Query 1047398 ATCAAAGAAAAGTTAATATGTTAGCCATTGAATAT-----GCTAAACGTAATAATTTAAA 1047452 ||||||||||||| ||||||||||| | |||||| |||| ||||| ||| Sbjct 858331 ATCAAAGAAAAGTAAATATGTTAGCTAGAGAATATTGTGACATAAAAAAAATAA--AAAA 858274 Query 1047453 AACACCAATTATTTTATCTCACCATATGTTAATGGGATTGAAAG-GTTCCAAAAATAAAA 1047511 || ||| | ||||||||||| |||||| || || || | ||| || |||| Sbjct 858273 AAAACCTGTCATTTTATCTCATGGAATGTTACCAGGTTTATTAGAGGGACAAGAA-AAAA 858215 Query 1047512 TGAGTAAATCTGATCCTGAAAA---TGCCATATTTATGGAAGATAGTCGTGAAGATATAT 1047568 || || || || |||||| ||| || |||||||| |||| | | ||| | Sbjct 858214 TGTCAAAGTCAGA---TGAAAACTCTGCAATTTTTATGGACGATAATGAAGCCGATGTTA 858158 Query 1047569 TTaaaaaaaTACACAAAGCATATTGC---ACAGACGAAATTATTGATAATCCAATTTATG 1047625 || ||||| | |||| |||||| || | | |||| ||||||| |||| || Sbjct 858157 ATAGGAAAATTAAAAAAGGCTATTGCCCTCCAAATGTAATTGAAAATAATCCTATTTTTG 858098 Query 1047626 AATAT 1047630 |||| Sbjct 858097 CATAT 858093 >seq13 Length=615600 Score = 113 bits (124), Expect = 4e-19 Identities = 202/290 (70%), Gaps = 4/290 (1%) Strand=Plus/Minus Query 344255 TTTTATCTCCCACCATTTGTTTGAGACGTTGATAATATGTTGGACCAATGAATATTTTAA 344314 |||||||| | ||||| ||||| | | ||||||| ||||||| || || |||||||| Sbjct 433976 TTTTATCTTCTACCATATGTTTTAATCTTTGATAAAATGTTGGTCCTATAAATATTTTCG 433917 Query 344315 CTTCCATTCTTTGTCCCGTCAT-TCCATTATACATTGTTTCATTTCCCCATGCTTCATGT 344373 || | | || | || | || ||||||||| | | | ||||| || || ||||| Sbjct 433916 ATTTTAG-CATTCTACCATTATGTCCATTATATAATATATCATTACCATATTTTTCATAA 433858 Query 344374 CCTAAAGCTAC-TAAATCATCATTAATTTTATTAATATTAACTCCTGTAAATGGAGTTGC 344432 ||||| ||| |||| ||| ||||| | || ||| | | |||||| ||||| Sbjct 433857 CCTAAT-CTATGTAAACGTTCAGAAATTTCTTGAACTGTAATTTTAGAAAATGGGGTTGC 433799 Query 344433 ATCTCCATATACCCCTTTAATTGCACAAACTTTACCTAGTAAACATTCAATTAATTGACC 344492 |||||| | | | || | ||| ||| |||||||| ||| ||||||| ||| || || Sbjct 433798 ATCTCCTTCTCCTCCCTCAATAGCAGCTACTTTACCAGCTAAGCATTCAACTAAATGCCC 433739 Query 344493 TATCGTCATACGTTTGGGCATACAATTAGGATTAATAATAATATCAGGAA 344542 || |||||||| || | || || || |||||||||||||||| Sbjct 433738 GATAGTCATACGAGATGGAACTGCATGTGGGTTCATAATAATATCAGGAA 433689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029293408659010