Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq5 89.7 4e-13 >seq5 Length=1684710 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||||| || ||||||||||| || || ||||||| | ||| | || || Sbjct 156744 ACCAAATGTAAGGTTGATTCTTTTTGAATGTTATAGTCAGATAAAGTTCTGCCATCTTCT 156685 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || || || || ||||| || | || |||||||| | ||||| || || || || Sbjct 156684 AATTGTTTTCCAGCAAAAATTAATCTTTGTTGATCAGGGGGAATTCCTTCTTTATCTTGG 156625 Query 48678 ATCTTTTGTTTTACAGAACCCACAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTTT 48737 || ||| ||| ||| | | | ||||| | || || || | ||||| |||||| Sbjct 156624 ATTTTTGCTTTAACATTTTCAATTGTATCTGATGGTTCAACATCAAGAGTAATTGTTTTT 156565 Query 48738 CCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || || ||||||||||| || ||||| Sbjct 156564 CCGGTTAATGTTTTTACAAAGATTTGCAT 156536 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380937372508827