Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq11 605 4e-168 seq7 340 2e-88 seq8 241 2e-58 seq5 145 1e-29 seq6 122 1e-22 >seq11 Length=733468 Score = 605 bits (670), Expect = 4e-168 Identities = 1125/1632 (69%), Gaps = 21/1632 (1%) Strand=Plus/Plus Query 195298 AGCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCG 195357 |||||| |||||||||||||| || |||||||| ||||||||||||||| |||||| Sbjct 351566 AGCTATAGGTATCGATTTAGGTACCACTTACTCCTGTGTTGGTGTATGGAGAAATGAAAA 351625 Query 195358 TGTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTAC 195417 ||| || || || | || |||||||| ||| | ||||| ||||| || ||||| || || Sbjct 351626 TGTTGATATAATTGCCAACGACCAAGGTAACAGAACAACCCCATCCTATGTTGCTTTCAC 351685 Query 195418 AGATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAA 195477 |||| ||| | | |||| ||||| || ||||| || || | ||||| || Sbjct 351686 TGATACAGAAAGATTAATTGGTGATGCAGCTAAAAACCAAGTTGCAAGAAACCCAGAAAA 351745 Query 195478 TACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGA 195537 ||| ||||| || || || | | |||||| | || ||| | || || ||| Sbjct 351746 TACAGTCTTCGATGCAAAAAGATTAATTGGTAGGAAATTTACAGAATCTTCTGTACAAAG 351805 Query 195538 CGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAA 195597 ||||| ||| | ||| | | | |||| | ||| | | || |||||||||||| | Sbjct 351806 TGATATGAAGCATTGGCCATTTACAGTTAAATCAGGTATTGAAGAAAAGCCTATGATTGA 351865 Query 195598 TGTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTT 195657 |||| | ||| ||||| || ||| |||| || ||||||||||| |||||||| || Sbjct 351866 AGTTGTTTATCAAGGTGAAAAAAAATTATTTCACCCTGAAGAAATTTCTTCTATGGTTTT 351925 Query 195658 GATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGT 195717 || ||||| || | ||| ||| | || | || ||| || | ||| |||||||| | Sbjct 351926 ACAAAAAATGAAAGAAAATGCAGAAGCCTTTTTAGGAAAATCTATAAAAAATGCAGTTAT 351985 Query 195718 GACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTAT 195777 || |||||||| || || | ||| || ||| |||| || ||||| || |||| | | || Sbjct 351986 TACAGTACCTGCATATTTTAATGACTCTCAAAGACAAGCAACAAAAGATGCTGGTACAAT 352045 Query 195778 TGCGGGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 ||| || |||| | | |||||||| || |||||||| || || || ||||| ||||| Sbjct 352046 TGCAGGATTAAATGTTATGAGAATTATAAACGAACCAACTGCAGCAGCTATTGCATATGG 352105 Query 195838 TCTGGACAAGAACAAGG--ACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGT 195895 | | ||| || |||| | | ||| |||||| |||| ||||| ||| | || |||||| Sbjct 352106 TTT--ACATAAAAAAGGAAAGGGAGAAAAAAATATATTAATCTTCGATTTAGGAGGTGGT 352163 Query 195896 ACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 || |||||||| ||| | || | |||||||| ||||||||| ||||| ||||| || || Sbjct 352164 ACTTTTGATGTTTCATTACTTACTATTGAAGATGGTATATTTGAAGTTAAGGCAACAGCA 352223 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT-CTGA 196014 || ||||| ||| |||||||||||||||| ||| ||| || | ||||| ||| Sbjct 352224 GGAGATACCCATTTAGGTGGTGAAGATTTTGATAACCGT-TTAGTTAACTTTTGTGTTGA 352282 Query 196015 TGAGTTCCGTCGAAAGAATA-AG--AAAGATATTTCTGGAAATCCTAGGGCTCTTCGTCG 196071 || || |||| |||| || |||||| | || |||| ||| ||| | | | Sbjct 352283 AGATTTTAAAAGAAAAAATAGAGGAAAAGATTTATCAAAAAATAGTAGAGCTTTAAGAAG 352342 Query 196072 GCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTCTTCTACGGCTCAAACAATGGT 196131 | || || ||||||| | || ||||| || | |||||| | ||||| | | | Sbjct 352343 ATTAAGAACACAATGTGAAAGAGCAAAACGTACATTATCTTCTTCAACTCAAGCCACAAT 352402 Query 196132 TGAGATTGATTCGTTGTTTGACGGAATTGACTTCTA-TACAACTATTACCCGTGCACGTT 196190 ||| |||||||| | ||||| || ||||| || || | ||| ||| | || | | Sbjct 352403 TGAAATTGATTCTCTTTTTGAAGGTATTGA-TTATAGTGTAACAGTTAGTAGAGCTAGAT 352461 Query 196191 TTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGA-ACCTGTTGAACAAGTACTT 196249 | ||||| ||| || | |||| || | || | ||| |||||| |||| | Sbjct 352462 TCGAAGAATTATGTATCGACTATTTTA-GAGATACATTAATACCAGTTGAAAAAGTTTTA 352520 Query 196250 CGTGACGCAAAGATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCAACC 196309 || || | ||||||||| | || ||||| ||||| | || || ||||| || Sbjct 352521 AAAGATGCCATGATGGATAAAAAGAGTGTCCATGAAGTTGTCTTAGTTGGTGGATCTACA 352580 Query 196310 CGTATTCCGAAGATTCAACAGATGCTTTCTAG-CTTCTTCAATAATAAAGATTTAAACAA 196368 | ||||| || |||||| | || | || || || ||| ||||| | || Sbjct 352581 AGAATTCCAAAAATTCAA-ACATTAATAAAAGAATTTTTTAATGGAAAAGAAGCATGCAG 352639 Query 196369 AACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTCTC 196428 | | || || || |||||||| |||||||||||||| || ||||| ||||| ||| | || Sbjct 352640 ATCAATAAATCCTGATGAAGCTGTTGCTTATGGTGCTGCTGTTCAAGCTGCCATTTTATC 352699 Query 196429 AGGTGTTGACAAT--AATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCC 196486 ||||| | |||| ||| || |||||| | | || | ||||| || |||| Sbjct 352700 AGGTGAT--CAATCCAATGCAGTACAAGATTTATTATTATTAGATGTCTGTTCCTTATCT 352757 Query 196487 CTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATT 196546 | || | ||||| || || ||||||||||| ||| | ||||| || || ||||| ||| Sbjct 352758 TTAGGATTAGAAACTGCAGGAGGTGTTATGACAAAATTAATTGAAAGAAATACAACAATT 352817 Query 196547 CCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATT 196606 || | || || ||| ||||| | || ||| | ||||||||||||||||| || Sbjct 352818 CCAGCAAAAAAAAGTCAAATCTTTACTACCTATGCTGATAATCAACCAGGTGTATTAATA 352877 Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGG-AACTTTCGA 196665 |||||||||||||||||| | | | | || || ||| | || | || || |||| | Sbjct 352878 CAAGTATATGAAGGAGAAAGAGCTCTAACTAAAGACAACAACTTATTAGGTAAATTTC-A 352936 Query 196666 TTTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCCACAGATTAATGTTTGCTTCGATAT 196725 ||| || |||||| |||| || ||| || ||||| ||| | ||| |||||||| Sbjct 352937 TTTAGATGGTATTCCACCTGCTCCTAGAAAAGTACCACAAATTGAAGTTACATTCGATAT 352996 Query 196726 AGACGCAAATGGAATTCTAAACGTCACAGCTGAGGACAAGGCTTCTGGCAAATCTGAAAA 196785 || |||||||| ||| |||| |||||||||| || || | |||| ||| | | Sbjct 352997 TGATGCAAATGGTATTTTAAATGTCACAGCTGTTGAAAAAAGTACTGGTAAACAAAATCA 353056 Query 196786 GATTGTGATTACCAATGACAAGGGGCGGCTTTCTAAGGAGGAAATTGAACGTATGGTTCA 196845 || ||||| |||||||| || | | ||| || |||||||| | |||||| | Sbjct 353057 TATCACAATTACTAATGACAAAGGTAGATTATCTCCTGAAGAAATTGATAGAATGGTTAA 353116 Query 196846 AGATGCGGAAAAGTACAGGGAAGAAGACGAGGTATATGAGAAACAGATGAAAGCTATAAA 196905 ||||| ||||| || | | |||||| || | | || | ||| || |||| | ||| Sbjct 353117 TGATGCTGAAAAATATAAAGCAGAAGATGAAGAAAATAAAAAAAGAATTGAAGCAAGAAA 353176 Query 196906 TGATCTAGAAAA 196917 ||| ||||| Sbjct 353177 CAGTCTTGAAAA 353188 >seq7 Length=1182114 Score = 340 bits (376), Expect = 2e-88 Identities = 934/1415 (66%), Gaps = 46/1415 (3%) Strand=Plus/Plus Query 195301 TATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGTGT 195360 |||||||||||||||||| ||||||||| ||||||||||||| |||||| | || Sbjct 595639 TATTGGTATCGATTTAGGTACTACTTACAGTTGTGTTGGTGTATTTAAAAATGGAAGAGT 595698 Query 195361 AGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACAGA 195420 || || | ||||| ||| ||||||| |||||||| || || | ||| || Sbjct 595699 TGAAATATTAAACAATGATTTAGGTAACCGTATTACTCCATCATATGTATCATTTGTTGA 595758 Query 195421 TAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTA---TGAACCCTA-TCA 195476 | ||| | ||||| || || || ||| | ||| ||||| | |||| | ||| Sbjct 595759 TGGAGAAAGGAAAGTTGGTGAAGCAGCTAAA--TTAGA-AGCTACTTTACACCCAACTCA 595815 Query 195477 ATACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAG 195536 | ||||| ||||||| ||| | ||||| ||| | || ||| ||||| |||| | Sbjct 595816 A-ACTGTATTTGACGTTAAGAGACTTATAGGTAGAAAATTTGATGATAAAGAAGTAGCAA 595874 Query 195537 ACGATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTA 195596 | |||| || | | |||||| | || | || | | || || | || | Sbjct 595875 AAGATAGAACTTTATTACCATATGAAATAGTAAACAATGAAGGT---AAACCAAATATAA 595931 Query 195597 ATGTTGAATTTCACGGTGAGAAGAAACAA-----TTTGCTCCCGAAGAAATTTCGTCTAT 195651 ||| || | | ||| || | | ||||| || ||| ||||| |||| Sbjct 595932 GAGTTCAAATAAA-----AGACAAACCCACTACTTTTGCACCTGAACAAATTAGTGCTAT 595986 Query 195652 GGTGTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGC 195711 ||| || || ||||| || | ||| |||| || |||||||| | || ||| |||| Sbjct 595987 GGTTTTAGAAAAAATGAAAGAAATTGCTCAATCATTTTTGGGTAAACCCGTCAAAAATGC 596046 Query 195712 AGTTGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGC 195771 ||||| ||||||||||| || |||| |||| ||||| |||| || ||||| || |||| Sbjct 596047 TGTTGTTACTGTACCTGCATATTTCAATGATGCACAAAGACAAGCTACAAAAGATGCTGG 596106 Query 195772 TGCTATTGCGGGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTG 195830 ||| ||||| || |||| | | || | ||||| |||||||| || || ||||| | | Sbjct 596107 TGCAATTGCTGGATTAAA-TATAGTACGTATTATTAATGAACCCACCGCTGCTGCTTTAG 596165 Query 195831 CTTATGGTCTGGACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTG 195890 |||||||| | || || || ||||| | || | | || | | ||| | || | Sbjct 596166 CTTATGGTTTAGATAAAAAA------GAAGAAACAAGTATTTTAGTATACGATTTAGGAG 596219 Query 195891 GTGGTACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTA 195950 ||||||| |||||||| || || | ||| || |||| |||| ||||| | || | Sbjct 596220 GTGGTACTTTTGATGTTTCTATTTTAGTTATAGATAATGGTGTATTTGAAGTCTATGCAA 596279 Query 195951 CTGCTGGTGATACTCATCTAGGTGGTGAAGATTTCGATGCACGTCTTCTCCGTCATTTGT 196010 | || ||| ||||||| |||| ||||||||||| ||| | | || | | |||| Sbjct 596280 CAGCAGGTAATACTCACTTAGGAGGTGAAGATTTTGATCAAAGAGTTATGGATTATTTTA 596339 Query 196011 CTGATGAGTTCCGTCGAAAGAATAAGAAAGATATTTCTGGAAATCCTAGGGCTCTTCGTC 196070 | | ||| ||| ||||| | |||| || | || || ||| ||| Sbjct 596340 TTAAAATGTTTAAAAAAAAAAATAATATAGATCTTAGATCAGATAAAAGAGCTATTCAAA 596399 Query 196071 GGCTTAGGACTGCATGTGAACGTGCCAAACGAACTCTCTC--TTCTACGGCTCAA-ACAA 196127 | || | | | |||| ||| ||| ||| | || || | | ||||| |||| Sbjct 596400 AATTAAGAAAAGAAGTTGAAATTGCAAAAAGAAACTTATCAGTTGTTCA-CTCAACACAA 596458 Query 196128 TGGTTGAGATTGATTCGTTGTTTGACGGAATTGACTTCTATACAACTATTACCCGTGCAC 196187 |||| ||||| | |||| ||| | |||| | ||| | || | || Sbjct 596459 A--TTGAAATTGAAGATATAGTTGAAGGACATAACTTTTCAGAAACATTAACAAGAGCCA 596516 Query 196188 GTTTTGAAGAGTTAAACTCTGATTTGTTTAGGAAGTGTATGGAACCTGTTGAACAAGTAC 196247 || ||||| ||||| |||||||||||| | | | ||||||||| || ||||| Sbjct 596517 AATTCGAAGAATTAAATGATGATTTGTTTAGAGAAACTTTAGAACCTGTTAAAAAAGTAT 596576 Query 196248 TTCGTGACGCAAAG-ATGGATAAGTCTAAGGTTGATGAAATTGTCCTTGTGGGAGGATCA 196306 | ||| ||||| ||| | || | || | ||||||||||| | || ||||| ||| Sbjct 596577 TAGATGATGCAAAATATGAAAAAAGCAAAA-TCGATGAAATTGTTTTAGTAGGAGGTTCA 596635 Query 196307 ACCCGTATTCCGAAGATTCAACAGATGCTTTCTAGCTTCTTCAATAATAAAGATTTAAAC 196366 || ||||| || || || ||||| || || ||| |||||| |||||| ||| Sbjct 596636 ACTCGTATACCTAAAATCCAACAAATTATTAAAGACTTTTTCAATGGTAAAGAACCAAAT 596695 Query 196367 AAAACGATCAACCCGGATGAAGCAGTTGCTTATGGTGCGGCCGTTCAGGCTGCTATTCTC 196426 | | || ||||| |||||||| || || |||||||| || |||| |||| |||| | Sbjct 596696 AGAGGTATTAACCCAGATGAAGCTGTAGCATATGGTGCTGCTATTCAAGCTGGTATTATT 596755 Query 196427 TCAGGTGTTGACAATAATAACGTCCAAGATCTTCTGCTACTTGATGTTGCACCCGTATCC 196486 | ||| | || ||| || ||||| || | | | |||||| | || || | Sbjct 596756 TTAGGAG-----AAGAATTAC----AAGATGTTGTATTGTTAGATGTTACTCCATTAACT 596806 Query 196487 CTGGGTCTTGAAACAGCGGGTGGTGTTATGACTAAAATTATTGATAGGAACACAACTATT 196546 | ||| ||||||| | |||||| |||||||| || | ||| | || || ||| ||| Sbjct 596807 TTAGGTATTGAAACTGTTGGTGGTATTATGACTCAATTAATTAAAAGAAATACAGTTATC 596866 Query 196547 CCGACTAAGAAGGAACAAGTCTTTTCAACGTATTCCGATAATCAACCAGGTGTTCATATT 196606 || || || || |||| ||||||||| ||| ||||||||||||| |||| ||| Sbjct 596867 CCAACAAAAAAATCACAAACCTTTTCAACCTATCAAGATAATCAACCAGCTGTTTTAATT 596926 Query 196607 CAAGTATATGAAGGAGAACGCTCCCGTGCAAAGGATAACCATCTACTTGGAACTTTCGAT 196666 ||||| | |||||||||| | | | || ||||| ||| || | |||| || || Sbjct 596927 CAAGTTTTTGAAGGAGAAAGAGCATTAACTAAAGATAATCATTTATTAGGAAAATTTGAA 596986 Query 196667 TTGACGGGGATTCCAGCTGCACCCAGAGGTGTTCC 196701 | | || |||||| |||||| |||||||| || Sbjct 596987 CTATCTGGTATTCCACCTGCACAAAGAGGTGTACC 597021 >seq8 Length=956651 Score = 241 bits (266), Expect = 2e-58 Identities = 1042/1621 (64%), Gaps = 44/1621 (3%) Strand=Plus/Plus Query 77951 CCTCAATACTTATTCATGCGTGTTTCTATTGGTATTCATGGAAATGATATTCCAGCGGTA 78010 |||||| | ||||| ||| | || ||||| || || ||| |||||||| | | Sbjct 456554 CCTCAACATTTATTAATGAGAGTATCTATAGGAATACATATTGATGATATTGAAAAAGCT 456613 Query 78011 CTTGAAACGTATGATAAAATGTC-CAATGGTATGTTTATTCACGCAACACCTACTTTGTT 78069 | ||||| || || |||||| ||| ||| |||| ||| || || ||||| || || Sbjct 456614 TTAGAAACTTACCATTTAATGTCTCAAAAATAT-TTTACTCATGCTACTCCTACATTATT 456672 Query 78070 TAATGCAGGTACTCCCCGTCCACAGATGTCATCTTGTTTCCTACTTGCAAATAAGGAGGA 78129 |||| | || || || | || || ||||| || ||||| || | ||| || || Sbjct 456673 TAATTCGGGAACACCAAGACCCCAAATGTCTTCATGTTTTTTATTATCAATGAAATCTGA 456732 Query 78130 CTCTATTAATGGTATATACGGGACTCTCACAGAGTGTGCTCAGATTTCTAAGTGGGCTGG 78189 || || | ||||||| | || | | | ||||| ||| ||| || || Sbjct 456733 TTCAATAGAAGGTATATTTGAAACATTAAAGCAATGTGCATTGATCAGTAAAACAGCAGG 456792 Query 78190 TGGTATAGGTCTTCATATTCACGATGTTCGTGCAAACAAGTCCAGGATTAGAGGAACTAA 78249 ||||||||| || | | || ||| |||| | | | || || |||||||||||||| Sbjct 456793 AGGTATAGGTGTTGCTGTACAAGATATTCGAGGACAAAATTCTTATATTAGAGGAACTAA 456852 Query 78250 TGGTCAGTCTGATGGAATTATTCCTATGCTTAGGGTATTCAATGCTACAGCACGCTATGT 78309 |||| || |||| | |||| ||| | || || || |||| ||||||| | ||||| Sbjct 456853 TGGTATATCAAATGGGTTAGTTCCAATGTTAAGAGTTTTTAATGATACAGCAAGATATGT 456912 Query 78310 CAACCAAGCGGGTCG---TAGGAAGGGGTCATTCGCTATGTACCTTGAACCTTGGCACGC 78366 | |||| || | || || || || || ||| | || |||| || |||||| | Sbjct 456913 AGATCAAGGTGGCGGAAAAAGAAAAGGTTCTTTTGCTGTATATATTGAGCCATGGCACTC 456972 Query 78367 CGATGTAATGGATTTTTTGGAACTTCGTCTCAACCAGGGTGACGAGGAAGCTCGATGCAG 78426 ||| | | || ||||| || | | || || ||| | || ||| || | Sbjct 456973 TGATATTTTTGAATTTTTAGATTTAAGAAAAAATCACGGTAAAGAAGAATTAAGAGCTCG 457032 Query 78427 GGATTTATTCACTGCTATGTGGATTCCGGATCTTTTTATGAAGAGAGTTGAGGAAGGAGG 78486 |||||||| |||||| ||| | || ||| | ||||||||||| ||| ||| | Sbjct 457033 TGATTTATTTTATGCTATATGGGTACCTGATTTATTTATGAAGAGGGTT---AAAGAAAA 457089 Query 78487 TAAA---TGGTCTCTTTTCTGTCCAGATAAGACTAAGGGTCTTTCAG---ATGTATACGG 78540 |||| ||| || | | ||||| || | | || ||| || || | | || Sbjct 457090 TAAACACTGGACTTTAATGTGTCCTAATGAATGTCCAGG--TTTAAGTGAATCT-TGGGG 457146 Query 78541 GGAAGAATTCGAAAAATTGTACACTAAATACGAAGAGGAAGGTCTCGCTATTAAGACAAT 78600 |||||||| |||||||| || || ||||| ||||| ||| | | | || || ||| | Sbjct 457147 TGAAGAATTTGAAAAATTATATACAAAATATGAAGAAGAAAATTTAGGTAAAAAAACAGT 457206 Query 78601 TGATGCATCTGAACTATGGAAAGCTATTATCAAAAGTCAAACAGAGACCGGCACCCCGTA 78660 | |||| || ||||| ||||| | |||| |||| || || || || || Sbjct 457207 TCTTGCACAAGATTTATGGTTTGCTATATTACAAAGCCAAATTGAAACTGGTGTACCATA 457266 Query 78661 TATGCTATACAAAGACAGCTGTAACAGAAAGTCTAACCAAAAGAACCTAGGTGTCATCAA 78720 |||| |||| ||||| ||||| || ||||| ||||| || |||| || || Sbjct 457267 TATGTTATATAAAGATGCATGTAATTCTAAATCTAATCAAAAAAATTTAGGGACAATTAA 457326 Query 78721 AAGCTCTAACCTTTGCACAGAAATTCTGGAATACACGGATAA--GAATGAAACAGCTGTA 78778 | | ||| | || |||||| | ||||| || || | ||||| |||||| Sbjct 457327 ATGTAGTAATTTATGTTGTGAAATTATTGAATATAC--ATCACCTGATGAAGTAGCTGTT 457384 Query 78779 TGTAATCTAGGGTCTATCGCTCTACCAAAGTTTGTTGATCGAGAATTAAAGACATTTGAT 78838 |||||||||| || || || || || ||||||||| ||||| ||| |||| || Sbjct 457385 TGTAATCTAGCTTCAATTGCATTATGTAAATTTGTTGATAGAGAAAAAAAAGAATTTAAT 457444 Query 78839 TATTCAAAGCTCCACGAAATTACAAAAATCGTAACTAAAAATTTAAATCGTGTAATTGAC 78898 | | ||| | |||| ||||| ||||| | |||| ||||||| || | ||||| Sbjct 457445 TTTAAAAAATTATACGATATTACTAAAATTATTACTAGAAATTTAGATAAAATTATTGAA 457504 Query 78899 CGTAACTACTACCCAGTCGAGACTGCTAAATATTCTAATATGAAACATAGACCAATTGGT 78958 | || || |||||| | | ||| || | || |||| | ||||||||| ||||| Sbjct 457505 AGAAATTATTACCCAATTAAAGAAGCTGAAAAATCAAATAAAAGACATAGACCTATTGGA 457564 Query 78959 CTAGGTGTTCAAGGATTGGCAGATGTATTCA-ACTTGTGTGGTCTTCCCTTCGATTGCGA 79017 |||| || |||||||| |||||| ||| | ||| | | | ||| | || | || Sbjct 457565 ATAGGAGTACAAGGATTAGCAGATACATTTATGCTTTTAAGAT-ATCCATATGAATCTGA 457623 Query 79018 AGATTC-AAGGACTATGAATGCTCATATTTTCGAGACTATTTATCATGCAGCTTTAGAA- 79075 || | || || | | ||| || || || ||||| ||| |||| ||||||||| Sbjct 457624 GGAAGCTAAAGAAT-TAAATAGAAGAATATTTGAAACTATGTATTATGCTGCTTTAGAAA 457682 Query 79076 -GCAAGTTCAGAACTTGCTGAAATTAATGGGCCTTATGAGAGTTTCGAGGGTTCACCCGC 79134 | ||| ||| | || || | ||||| || ||||| | | ||| || || Sbjct 457683 TGTCGGTT--GAATTAGCACAAGTAAATGGCCCATATGAATCATATCAAGGTAGTCCAGC 457740 Query 79135 TTCACAAGGTCTTCTTCAACCAGATCTATGGGAAGGTGAAGCTAAATACAGTGGTCGTTA 79194 |||| | | ||| ||| | | |||| | || || || | | || Sbjct 457741 AAGCAAAGGAATATTACAATTTGATATGT-GGAATGCAAAAGTAGAT--AATAAATATTG 457797 Query 79195 CGATTGGGATGCAATGAGAAAGCGTGTAATGACGAAGGGTCTGAGAAACAGTCTTCTCGT 79254 ||||||||| | | | ||| ||| | | | || | ||||| |||||| | Sbjct 457798 GGATTGGGATTTATTAAAAAAAAAAATAAGTATGCATGGATTAAGAAATTCTCTTCTTTT 457857 Query 79255 AGCACCAATGCCCACTGCTTCGACGGCTCAGATCCTCGGTAATAATGAGTGTTTTGAACC 79314 |||||| ||||| || ||||| || | || || | || |||||||| | |||||||| Sbjct 457858 AGCACCTATGCCAACAGCTTCAACTTCACAAATTTTAGGAAATAATGAATCCTTTGAACC 457917 Query 79315 ATACACTACAAACATATATCTTCGTCGCACATTAGCTGGTGAATTTGTTGTGGTTAACAA 79374 ||| || | ||||| ||| | | || ||| |||||||||| |||| || || Sbjct 457918 ATATACAAGTAACATTTATTATAGACGTGTTTTAAGTGGTGAATTTTTTGTTGTCAATCC 457977 Query 79375 ACATCTTGTTGAAGAT-TTGAAGA-AGTTAGGTCTTTGGTCAAAAGAGATGA---AAGAC 79429 ||| | | ||||| || || || |||||||||| |||| |||| || | Sbjct 457978 CCATTTATTAAAAGATCTTTTTGATAG--AGGTCTTTGGGATGAAGATATGAAACAACAA 458035 Query 79430 TTAATGGTCAAAGCCGGAGGGAGTGTGCAAAACA-TAGTAGAGATACCAGATAATATTAA 79488 ||||| | | | ||| ||||| ||| | | |||| || ||||| | | | || Sbjct 458036 TTAATTGCCCATAATGGA---AGTGTCCAATATATTAGT-GAAATACCTAGTGACTTGAA 458091 Query 79489 AAATCTTTATAAGACTGTTTGGGAAATTAGCCAAAAATGTATTATCGACATGGCAGCGGA 79548 | | | ||||| || ||||||||||| | |||||| |||||| || ||||| || || Sbjct 458092 AGAATTGTATAAAACAGTTTGGGAAATCAAACAAAAAAATATTATTGATATGGCTGCTGA 458151 Query 79549 C 79549 | Sbjct 458152 C 458152 Score = 143 bits (158), Expect = 4e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 171860 GTATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGT 171919 |||||||||| || || ||||| | || |||||||| ||||| || || || || | | Sbjct 415283 GTATGCAAATTTTCGTAAAAACATTAACAGGAAAAACAATCACTCTTGATGTCGAACCAT 415342 Query 171920 CAGACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATC 171979 | || || || || || | ||||| || ||||||||||| ||||| || ||||| |||| Sbjct 415343 CTGATACTATTGAAAATGTTAAAGCAAAAATTCAAGATAAAGAAGGTATCCCACCTGATC 415402 Query 171980 AGCAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACA 172039 ||||| || | ||||||||||| ||||| | ||||||||| | || | ||||||| | Sbjct 415403 AGCAAAGATTAATTTTTGCTGGAAAACAATTAGAAGATGGAAGAACATTATCTGATTATA 415462 Query 172040 ACGTTCAAAAGGAGTCTACTCTACACCTTGTTCTAAG 172076 | | ||||| || || || |||| | ||| |||| Sbjct 415463 ATATACAAAAAGAATCAACATTACATTTAGTTTTAAG 415499 Score = 116 bits (128), Expect = 5e-21 Identities = 124/164 (76%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 171889 GGAAAAACTATCACCCTCGAGGTTGAGTCGTCAGACACAATCGATAACATCAAAGCCAAG 171948 |||||||| ||||| || || || || | || || || || || || | ||||| || Sbjct 414686 GGAAAAACAATCACTCTTGATGTCGAACCATCTGATACTATTGAAAATGTTAAAGCAAAA 414745 Query 171949 ATTCAAGATAAGGAAGGCATTCCACCCGATCAGCAACGACTTATTTTTGCTGGTAAACAG 172008 ||||||||||| ||||| |||||||| ||||||||| || | ||||||||||| ||||| Sbjct 414746 ATTCAAGATAAAGAAGGTATTCCACCTGATCAGCAAAGATTAATTTTTGCTGGAAAACAA 414805 Query 172009 CTTGAAGATGGACGTACCCTCGCTGATTACAACGTTCAAAAGGA 172052 | |||||||| | || | |||| || ||| | ||||| || Sbjct 414806 TTAGAAGATGGCAGAACATTATCTGACTATAACATACAAAAAGA 414849 >seq5 Length=1684710 Score = 145 bits (160), Expect = 1e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 171862 ATGCAAATCTTTGTGAAAACCCTTACTGGAAAAACTATCACCCTCGAGGTTGAGTCGTCA 171921 |||||||||||||| ||||| | || |||||||| || || || || ||||| | ||| Sbjct 156536 ATGCAAATCTTTGTAAAAACATTAACCGGAAAAACAATTACTCTTGATGTTGAACCATCA 156595 Query 171922 GACACAATCGATAACATCAAAGCCAAGATTCAAGATAAGGAAGGCATTCCACCCGATCAG 171981 || ||||| || || | ||||| || || |||||||| ||||| ||||| || ||||| Sbjct 156596 GATACAATTGAAAATGTTAAAGCAAAAATCCAAGATAAAGAAGGAATTCCCCCTGATCAA 156655 Query 171982 CAACGACTTATTTTTGCTGGTAAACAGCTTGAAGATGGACGTACCCTCGCTGATTACAAC 172041 ||| || | ||||||||||| ||||| | |||||||| | || | |||| || ||| Sbjct 156656 CAAAGATTAATTTTTGCTGGAAAACAATTAGAAGATGGCAGAACTTTATCTGACTATAAC 156715 Query 172042 GTTCAAAAGGAGTCTACTCTACA 172064 ||||||| || || || |||| Sbjct 156716 ATTCAAAAAGAATCAACCTTACA 156738 >seq6 Length=1590816 Score = 122 bits (134), Expect = 1e-22 Identities = 232/333 (70%), Gaps = 18/333 (5%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 || ||||| || ||||| ||| || | | || | || || | | |||||| | ||| Sbjct 1035735 AAAATGAAAGAAACTGCTGAAAATTACTTAGGAAGAAAAGTACATCAAGCAGTTATTACT 1035794 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || ||||| || || | |||||||||| | || || ||||| || |||| | ||||| Sbjct 1035795 GTGCCTGCATATTTTAATGATTCACAAAGGCAAGCAACAAAAGATGCTGGTAAAATTGCA 1035854 Query 195782 GGTCTAAACTGTCTTA-GAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCT 195840 |||||| | ||| ||| ||||||| ||||||||||| || ||||| | |||| |||| | Sbjct 1035855 GGTCTAGA-TGTTTTAAGAATTATTAATGAACCAACTGCAGCTGCTTTAGCTTTTGGTTT 1035913 Query 195841 GGACAAGAACAAGGACGAAGATAAAAATGT-ATTGATCTT--TGATCTCGGTGGTGGTAC 195897 || || ||| || | |||| || || | | || ||| | || || ||||| Sbjct 1035914 AGA----AAAAAG--TGATGGTAAA---GTCATAGCTGTTTATGACTTAGGAGGAGGTAC 1035964 Query 195898 GTTTGATGTCTCACTTCT--CAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCT 195955 |||||||| ||| || | |||||| ||| ||| | || || ||||| || || | Sbjct 1035965 ATTTGATGTTTCAATTTTAGAAATATT--AGGAGGTGTTTTTGAGGTAAAAGCCACAAAT 1036022 Query 195956 GGTGATACTCATCTAGGTGGTGAAGATTTCGAT 195988 || |||| | |||| || |||||||| ||| Sbjct 1036023 GGAAATACCTCTTTAGGAGGAGAAGATTTTGAT 1036055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657861997059280