Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_022763.1 Length=164297 Score E Sequences producing significant alignments: (Bits) Value seq11 89.7 5e-13 >seq11 Length=733468 Score = 89.7 bits (98), Expect = 5e-13 Identities = 164/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Plus Query 18024 CCAAATATTTACATTTTTATCTACTAATGTTTTTAAATTCGTATCACCTTTTAGGAACCA 18083 ||| || |||||||||| |||| |||||| ||| ||| || || || ||| ||||| Sbjct 126425 CCATATTCTTACATTTTTTTCTAATAATGTATTTCCATTTGTTTCTCCCCTTATAAACCA 126484 Query 18084 TAGTAACTCTTCC--GCTACTAATCTAAAAGCTACATGTTTTGTTGTTAGTAACGGGAAT 18141 || ||||||||| | ||| ||| | | || | ||||||||||| ||| ||||| Sbjct 126485 TAATAACTCTTCAATGATACC--TCTTACAAATAATTTTTTTGTTGTTAATAATGGGAAA 126542 Query 18142 CCTTCTGACAAATCGAATTTCATCGTGTAGTCGAAGATACTTAATGTACCTGTTCCCGTT 18201 ||| |||| ||||||||| | || | || |||||||| ||| || ||| Sbjct 126543 TATTCACTTAAATTAAATTTCATCATATATCCAAATTTACTTAATACACCAACACCTGTT 126602 Query 18202 CTATCA-CTTCTAATTTCTCCATGCTTAATTATGTATTCATATAA-ATCTAAA 18252 |||||| ||| | | | ||||||| | ||||| | | |||||| || |||| Sbjct 126603 CTATCATCTTGT-TTATTTCCATGCATTATTATATCAT-ATATAATATTTAAA 126653 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525622078056280