Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq11 740 0.0 seq7 531 4e-145 seq6 250 2e-60 seq2 102 6e-16 seq4 98.7 7e-15 seq3 89.7 4e-12 seq10 87.8 1e-11 >seq11 Length=733468 Score = 740 bits (820), Expect = 0.0 Identities = 1143/1610 (71%), Gaps = 40/1610 (2%) Strand=Plus/Minus Query 281298 TTTTCTTGTTATCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGAT 281357 ||||||| |||| || ||| | ||| || ||| || ||| |||||| ||||||| | Sbjct 353152 TTTTCTTC--ATCTTCTGCTTTATATTTTTCAGCATCATTAACCATTCTATCAATTTCTT 353095 Query 281358 CTTCAGAGAATCTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTT----GTT 281413 | ||| ||||| || | ||||||||| || |||| || |||||| || Sbjct 353094 CAGGAGATAATCTACCTTTGTCATTAGTAATTGTGATATGATT----TTGTTTACCAGTA 353039 Query 281414 GATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCA 281473 ||| ||| | || || ||||| | ||||||||| ||||| | ||| ||||| |||||| Sbjct 353038 CTTTTTTCAACAGCTGTGACATTTAAAATACCATTTGCATCAATATCGAATGTAACTTCA 352979 Query 281474 ATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTA 281533 ||||| || || ||| |||||||||| || || || |||| |||| | || | || | Sbjct 352978 ATTTGTGGTACTTTTCTAGGAGCAGGTGGAATACCATCTAAATGAAATTTACCTA-ATAA 352920 Query 281534 -TTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACA---GT 281589 || || |||||||| | || ||| || || | | ||| || ||| |||| | Sbjct 352919 GTTGTTGTCTTTAGTTAGAGCTCTTTCTCCTTCATATACTTGTAT--TAA-TACACCTGG 352863 Query 281590 TTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT 281649 ||||||||| | ||| || ||||| | | |||||| ||||||||||| ||||| Sbjct 352862 TTGATTATCAGCATAGGTAGTAAAGATTTGACTTTTTTTTGCTGGAATTGTTGTATTTCT 352803 Query 281650 ATCAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGAC 281709 ||||| | || ||||||| ||| || || |||||||| || | ||| | | | ||| Sbjct 352802 TTCAATTAATTTTGTCATAACACCTCCTGCAGTTTCTAATCCTAAAGATAAGGAACAGAC 352743 Query 281710 ATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACA---AGAATAGCTGC 281766 ||| | || | | || ||| | | ||| | |||| || | | ||| || || Sbjct 352742 ATCTAATAATAATAAATCTTGTACTG---CATTGGATTGATCACCTGATAAAATGGCAGC 352686 Query 281767 TTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTT 281826 ||||| |||||||||||| |||||||||||||||||||| | | | | || ||| Sbjct 352685 TTGAACAGCAGCACCATAAGCAACAGCTTCATCAGGATTTATTGATCTGCATGCTTCTTT 352626 Query 281827 ACCATTGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTA-GGAATACGAGATGATCCTCCA 281884 ||||| ||||| | || | || ||| | | || ||||| | | ||||| ||| Sbjct 352625 TCCATTAAAAAATTCTTTTATTAA--TGTTTGAATTTTTGGAATTCTTGTAGATCCACCA 352568 Query 281885 ACTAATACAATTTCATGCAC-CTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTC 281943 ||||| |||| |||||| || || | |||||||| | | ||| |||||||||||| Sbjct 352567 ACTAAGACAACTTCATGGACACTCTT-TTTATCCATCATGGCATCTTTTAAAACTTTTTC 352509 Query 281944 AACGGGTTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGT 282003 ||| ||| | | ||||||| |||| ||| | |||||||||| |||||||| | Sbjct 352508 AACTGGTATTAATGTATCTCTAAAATAGTCGATACATAATTCTTCGAATCTAGCTCTACT 352449 Query 282004 AAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGT 282063 || || ||| |||||||||| ||||| || | |||||||| |||||| || | |||||| Sbjct 352448 AACTGTTACACTATAATCAATACCTTCAAAAAGAGAATCAATTTCAATTGTGGCTTGAGT 352389 Query 282064 CGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTT 282123 |||||||||| || |||||| || | ||||||| ||| |||| ||||| ||| ||| | Sbjct 352388 TGAAGAAGATAATGTACGTTTTGCTCTTTCACATTGTGTTCTTAATCTTCTTAAAGCTCT 352329 Query 282124 --TGCTGATTGATTCAAATCTGTTT---TATATTTTCTCTTGAAATCTTCAACACACCAT 282178 | | ||||| |||||| || ||| |||||| || |||||||||||||| | Sbjct 352328 ACTATTTTTTGAT--AAATCTTTTCCTCTATTTTTTCTTTTAAAATCTTCAACACAAAAG 352271 Query 282179 GTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTT 282238 | || | ||| ||||||||||||||||| || || | |||| ||||| || || | Sbjct 352270 TTAACTAAACGGTTATCAAAATCTTCACCACCTAAATGGGTATCTCCTGCTGTTGCCTTA 352211 Query 282239 ACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATA 282298 |||| || | |||||||||| || | | | ||||||| || ||||| || | | Sbjct 352210 ACTTCAAATATACCATCTTCAATAGTAAGTAATGAAACATCAAAAGTACCACCTCCTAAA 352151 Query 282299 TCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCA 282358 || || || | || ||| ||||| | | ||||||| | |||||| |||| ||| Sbjct 352150 TCGAAGATTAATATATTTTTTTCTCCCTTTCCTTTTTTATGTAAACCATATGCAATAGCT 352091 Query 282359 GCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCT 282418 || ||||||||||| || |||||||||| |||||| | || |||||| | || |||||| Sbjct 352090 GCTGCAGTTGGTTCGTTTATAATTCTCATAACATTTAATCCTGCAATTGTACCAGCATCT 352031 Query 282419 TTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT 282478 || || ||||||||||| || || |||||||||||||| || |||||||| |||| | || Sbjct 352030 TTTGTTGCTTGTCTTTGAGAGTCATTAAAATATGCAGGTACTGTAATAACTGCATTTTTT 351971 Query 282479 ACTTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAA 282538 | |||||| | | | || ||| ||| ||||||||| ||||| ||| || ||| Sbjct 351970 ATAGATTTTCCTAAAAAGGCTTCTGCATTTTCTTTCATTTTTTGTAAAACCATAGAAGAA 351911 Query 282539 ATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAA-AATATGGTTT 282597 |||| ||| || | || || |||| |||||| ||||||| ||| | ||| Sbjct 351910 ATTTCTTCAGGGTGAAATAATTTTTTTTCACCTTGATAAACAACTTCAATCATAGGCTTT 351851 Query 282598 ATTACCA-ACATTA-ATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGG 282655 | | | || | | ||||| |||||||||||| |||||||| ||| ||| Sbjct 351850 TCTTCAATACCTGATTTAACTGTAAATGGCCAATGCTTCATATCACTTTGTACAGAAGAT 351791 Query 282656 TCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACT 282715 || |||| | ||||||||||||| ||||||||| || | ||||| ||| || | Sbjct 351790 TCTGTAAATTTCCTACCAATTAATCTTTTTGCATCGAAGACTGTATTTTCTGGGTTTCTT 351731 Query 282716 GCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATAT 282775 ||| |||| | ||| |||||||| ||||| | |||||| || || || | |||||| Sbjct 351730 GCAACTTGGTTTTTAGCTGCATCACCAATTAATCTTTCTGTATCAGTGAAAGCAACATAG 351671 Query 282776 GATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCAT 282835 ||||| ||||| | |||||||| || || ||||| || ||||| || ||||| |||| Sbjct 351670 GATGGGGTTGTTCTGTTACCTTGGTCGTTGGCAATTATATCAACATTTTCATTTCTCCAT 351611 Query 282836 ACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCAATTTT 282885 ||||| ||||| |||| || |||||||| ||||| ||||| || || Sbjct 351610 ACACCAACACAGGAGTAAGTGGTACCTAAATCGATACCTATAGCTATGTT 351561 Score = 163 bits (180), Expect = 2e-34 Identities = 225/311 (72%), Gaps = 13/311 (4%) Strand=Plus/Minus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCA-ATGTTCTAAATACTCC 86018 ||||||||||| || || ||||| |||| || || |||| | ||| ||||| || Sbjct 352255 TCAAAATCTTCACCACCTAAATGGGTATCTCCTGCTGTTGCCTTAACTTC-AAATATACC 352197 Query 86019 ATTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTAC 86078 || | ||| | | ||| |||||||| || || ||| ||||||| || | | | || Sbjct 352196 ATCTTCAATAGTAAGTAATGAAACATCAAAAGTACCACCTCCTAAATCGAAGATTAATA- 352138 Query 86079 GTTACCACCAGtttttttATTCCATTTTTCACTTCC-TAAACCGTATGCAAGAGCTGCTG 86137 || ||||||| | || || | || |||||| ||||||| |||||||| Sbjct 352137 --TA-------TTTTTTTCTCCCTTTCCTTTTTTATGTAAACCATATGCAATAGCTGCTG 352087 Query 86138 CAGTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAG 86197 |||||||||| || || ||| | | ||||| ||| || |||||| || ||| ||| | Sbjct 352086 CAGTTGGTTCGTTTATAATTCTCATAACATTTAATCCTGCAATTGTACCAGCATCTTTTG 352027 Query 86198 TTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATAG 86257 |||||||||| || | ||||||||||||||| ||||| ||||||||||| || || |||| Sbjct 352026 TTGCTTGTCTTTGAGAGTCATTAAAATATGCAGGTACTGTAATAACTGCATTTTTTATAG 351967 Query 86258 GTTTTTGTAAA 86268 |||| |||| Sbjct 351966 ATTTTCCTAAA 351956 >seq7 Length=1182114 Score = 531 bits (588), Expect = 4e-145 Identities = 1119/1644 (68%), Gaps = 51/1644 (3%) Strand=Plus/Minus Query 281252 CTGTGAGTATAATTTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCT 281311 || ||| |||| || ||||| | |||||| || ||||| || || || |||||| Sbjct 597249 CTTTGAATATAGTTATCTAAGTTATTTTTTGATTCAACTTTTTCTCTTAAATTTTTATCT 597190 Query 281312 GCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTT 281371 | || |||||| || ||| || |||||||| | || ||||| |||| || ||||| Sbjct 597189 TCATCAGCAAATTTTTCAGCATCGTTAATCATTTTTTCTATTTGTTCTTTTGATAATCTA 597130 Query 281372 CCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTC 281431 || | |||||||||||| ||| ||| ||| |||| |||||| | || Sbjct 597129 CCTTTGTCATTAGTAATAGTTATACCTTTGCTTTTTCCTGTTCCTTTATCTTCTGCTTCA 597070 Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 |||| | ||||||||| ||| | | |||||| || || |||| ||| || ||||| Sbjct 597069 ACATGTAAAATACCATTTTTATCGACAGTAAATGTAACCTCGATTTTAGGTACACCTCTT 597010 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 || |||||||| || || | | |||| |||| | || |||||||||||| ||| Sbjct 597009 TGTGCAGGTGGAATACCAGATAGTTCAAATTTTCCTAATAAATGATTATCTTTAGTTAAT 596950 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 || ||| || || |||| ||| || ||| | | |||||||||| ||| |||| | Sbjct 596949 GCTCTTTCTCCTTCAAAAACTTGAATTAAAACAGCTGGTTGATTATCTTGATAGGTTGAA 596890 Query 281612 AATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTG-GTCATAAT 281670 || | |||||||| || || ||| ||||| | ||| | |||| |||||||| Sbjct 596889 AAGGTTTGTGATTTTTTTGTTGGGATAACTGTATTTCTTTTAATTA-ATTGAGTCATAAT 596831 Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 ||||||| | ||||| | ||| | || | ||||| ||||| | | |||| || ||| Sbjct 596830 ACCACCAACAGTTTCAATACCTAAAGTTAATGGAGTAACATCTAACAATACAACATCTTG 596771 Query 281731 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 281790 | || ||| || | || |||| | ||||||||||||||||||||||| || Sbjct 596770 TAATTCTTC---------TCCTAAAATAATACCAGCTTGAATAGCAGCACCATATGCTAC 596720 Query 281791 AGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAG 281850 ||||||||| || |||| | | |||| ||| ||||||||||||||| | | || || Sbjct 596719 AGCTTCATCTGGGTTAATACCTCTATTTGGTTCTTTACCATTGAAAAAGTCTTTAATAAT 596660 Query 281851 TTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGA 281910 |||| | ||||| ||||||| ||| ||||| ||||| |||||||||| | | || Sbjct 596659 TTGTTGGATTTTAGGTATACGAGTTGAACCTCCTACTAAAACAATTTCAT-CGATTTTGC 596601 Query 281911 TTTATCCA-GTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACA 281969 ||| | || ||||| ||| ||| ||||||| ||| ||||| | | ||||||||| Sbjct 596600 TTTTTTCATATTTTGCATCATCTAATACTTTTTTAACAGGTTCTAAAGTTTCTCTAAACA 596541 Query 281970 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 282029 | || | | |||||||||||| ||||| || | || | | | | | ||||| Sbjct 596540 AATCATCATTTAATTCTTCGAATTTGGCTCTTGTTAATGTTTCTGAAAAGTTATGTCCTT 596481 Query 282030 CGAACAAAGAATCAACTTCAATCGTAGT-TTGAGTCGAAGAA--GATAGTGCACGTTTAG 282086 | | | | |||| |||||| | || |||||| ||| || |||| | ||| | Sbjct 596480 CAACTATATCTTCAATTTCAAT--TTGTGTTGAGT-GAACAACTGATAAGTTTCTTTTTG 596424 Query 282087 CACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGAT-TGAT-TCAAATCTGT 282144 || |||| | || | |||| | || | | ||| || | || |||| | | |||| | Sbjct 596423 CAATTTCAACTTCTTTTCTTAATTTTTGAATAGCTCTT--TTATCTGATCTAAGATCTAT 596366 Query 282145 TTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATT--ATCAAAATCT 282202 |||| |||| | || || || || | | || | || || || |||||||||| Sbjct 596365 ATTATTTTTTTTTTTAAACATTTTAATAAA--ATAATCCATAACTCTTTGATCAAAATCT 596308 Query 282203 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 282262 |||||||| || | |||||| |||| || || |||| || | |||| || | | Sbjct 596307 TCACCTCCTAAGTGAGTATTACCTGCTGTTGCATAGACTTCAAATACACCATTATCTATA 596248 Query 282263 GACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 282322 |||| || ||||||| || ||||| || | ||| ||| | || | || | Sbjct 596247 ACTAAAATAGAAACATCAAAAGTACCACCTCCTAAATC--GTATACTAAAAT--ACTTGT 596192 Query 282323 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 282382 | |||| |||||||| | |||||| || ||||||||||| || |||||||||||||| Sbjct 596191 T--TCTTCTTTTTTATCTAAACCATAAGCTAAAGCAGCAGCGGTGGGTTCATTAATAATA 596134 Query 282383 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 282442 | | | ||| | ||||||||| || |||||||| || ||||||||||||| ||| Sbjct 596133 CGTACTATATTTAATCCAGCAATTGCACCAGCATCTTTTGTAGCTTGTCTTTGTGCATCA 596074 Query 282443 TTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT 282502 || ||||||||||| ||||||| ||| |||| | | || ||| || | | | | Sbjct 596073 TTGAAATATGCAGGTACAGTAACAACAGCATTTTTGACGGGTTTACCCAAAAATGATTGA 596014 Query 282503 GCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG-AATATTGCTT 282561 || ||| ||||||||| ||||| ||| | ||||||||| || | || | | | Sbjct 596013 GCAATTTCTTTCATTTTTTCTAAAACCATAGCACTAATTTGTTCAGGTGCAAAAGTAGTG 595954 Query 282562 GGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATTAATAAC---TTT 282618 || || ||| || ||| ||| | || |||| ||||| |||| | || || Sbjct 595953 GGTTTGTCTTTTATTTGA-ACTCTTATATTTGGT---TTACCTTCATTGTTTACTATTTC 595898 Query 282619 AAATGGCCA-ATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTA 282677 | |||| | | | ||| ||||| | || || |||| ||| | |||||| || | Sbjct 595897 ATATGGTAATAAAGTTC-TATCTTTTGCTACTTCTTTATCATCAAATTTTCTACCTATAA 595839 Query 282678 ATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCAT 282737 || || | ||||| | ||| | ||||| | | | ||||| |||| ||||| | Sbjct 595838 GTCTCTTAACGTCAAATACAGTTTGAGTTGGGTGTAAAGTAGCTTCTAATTTAGCTGCTT 595779 Query 282738 CTCCAATCAGATGTTCTGTCTCTGT----AAATGAAACATATGATGGAGTTGTGCGATTA 282793 | |||| | | || |||| | |||||| |||||||||||||| | || ||| Sbjct 595778 CACCAA----CTTTCCTTTCTCCATCAACAAATGATACATATGATGGAGTAATACGGTTA 595723 Query 282794 CCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAA 282853 ||| |||||| | ||||||||| | ||||||| ||||||| |||||||| || Sbjct 595722 CCTAAATCATTGTTTAATATTTCAACTCTTCCATTTTTAAATACACCAACACAACTGTAA 595663 Query 282854 GTTGTTCCTAAATCAATACCAATA 282877 || || |||||||| ||||||||| Sbjct 595662 GTAGTACCTAAATCGATACCAATA 595639 Score = 113 bits (124), Expect = 3e-19 Identities = 207/302 (69%), Gaps = 15/302 (5%) Strand=Plus/Minus Query 85960 TCAAAATCTTCTCCTCCCAAATGTGTATTACCACCTACTGCCAATGTTCTAAATACTCCA 86019 ||||||||||| ||||| || || |||||||| || ||| | | |||||| ||| Sbjct 596316 TCAAAATCTTCACCTCCTAAGTGAGTATTACCTGCTGTTGCATAGACTTCAAATACACCA 596257 Query 86020 TTTGAGATATTCATTAACGAAACATCTAATGTCCCAGCTCCTAAGTCATAAACAATTACG 86079 || ||| | | |||||||| || || ||| ||||||| || || || | | Sbjct 596256 TTATCTATAACTAAAATAGAAACATCAAAAGTACCACCTCCTAAATCGTATACTAAAA-- 596199 Query 86080 TTACCACCAGtttttttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCA 86139 ||| || ||| ||| ||||| | ||||||| || || | ||| || || Sbjct 596198 -TAC-------TTGTTTCTTC--TTTTTTAT---CTAAACCATAAGCTAAAGCAGCAGCG 596152 Query 86140 GTTGGTTCATTAATTATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTT 86199 || ||||||||||| || | | || ||| || |||||| | ||| ||| || Sbjct 596151 GTGGGTTCATTAATAATACGTACTATATTTAATCCAGCAATTGCACCAGCATCTTTTGTA 596092 Query 86200 GCTTGTCTCTGTGCGTCATTAAAATATGCTGGTACAGTAATAACTGCTTTATTAATAGGT 86259 |||||||| ||||| ||||| |||||||| |||||||||| ||| || || || | ||| Sbjct 596091 GCTTGTCTTTGTGCATCATTGAAATATGCAGGTACAGTAACAACAGCATTTTTGACGGGT 596032 Query 86260 TT 86261 || Sbjct 596031 TT 596030 >seq6 Length=1590816 Score = 250 bits (276), Expect = 2e-60 Identities = 838/1285 (65%), Gaps = 47/1285 (4%) Strand=Plus/Minus Query 281261 TAAT-TTTCTAATTCATTTTTAGAATCAACAGCAGCTTTTTTCTTGTTATCTGCTTCTTC 281319 |||| ||||| ||||||||| |||||| | |||||| | | |||| |||| Sbjct 1036982 TAATGTTTCTGCTTCATTTTTTGAATCAGTTAAATTTTTTTTATGTTGATCTTTTTCTCT 1036923 Query 281320 AAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATT 281379 | | || |||||| || |||| | || |||| |||| | || | || | | | Sbjct 1036922 ATTTAATTCGGCTTCTTGAACCATTTTTTCGATTTCTTCTTTACTCAAACCACCACTACT 1036863 Query 281380 ATTAGTAATAGTAATATTCTTGGATTTG-TTTGTTGATTTATCAGCGGCAGTCACATTAA 281438 || | ||||| || || ||| ||| ||||| ||||||| || | | ||||| Sbjct 1036862 -TTGG--ATAGTTAT-TTGTTGTTTTTTATTTGTCATTTTATCAATAGCTGAAATATTAA 1036807 Query 281439 GAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAG 281498 ||| |||| ||||| | ||||||||||||||||||||| || || ||||| | || | Sbjct 1036806 TAATTGCATTTGCATCAACATCAAATGTGACTTCAATTTGTGGAACACCTCTTGGGGCTG 1036747 Query 281499 GTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTT 281558 |||| || || |||||| ||||| || || | ||||| || | | || || || Sbjct 1036746 GTGGTATACCAACCAAATCAAATGAACCTAGCATTTTATTGTCACAGGCCATTTCTCTTT 1036687 Query 281559 CACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTC 281618 | || | || | || |||| | ||| |||||||||||||| ||||| ||||||| Sbjct 1036686 CTCCTTGAAATACTTTGATACTGACTTGAGTTTGATTATCTGCTGCAGTTGAAAATACTT 1036627 Query 281619 TGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCAG 281678 |||||||| ||||| ||||| ||||||| ||| | || || | || |||||| Sbjct 1036626 GAGATTTTTTGGTTGGAATAGTTGTATTTCTATTAATTAATTTTGTAAAAACACCACCTA 1036567 Query 281679 CTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTT 281738 ||||| | ||| | ||| | ||| | ||||| | || | | || || | ||| Sbjct 1036566 AGGTTTCAATACCTAAAGATAAAGGTATAACATCTAATAATAATAAATCTTTTA---TTT 1036510 Query 281739 CATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCAT 281798 | || ||| | || | |||| ||||||||||| |||| || ||||||| Sbjct 1036509 C-TCCTTTTAATACACCAC--------CTTGTATAGCAGCACCTAATGCTACTGCTTCAT 1036459 Query 281799 CAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT-- 281856 ||||||||||| ||| | | | || ||| |||| ||| | | ||| Sbjct 1036458 CAGGATTAACACTTTTTGATGGACTATT----TTGGAAAA-TTTCTTTTACTGTATCTGA 1036404 Query 281857 TACCTTAGGAATACGAGATGAT-CCTCCAACTAATACAATTTCATGCACCTGTGATTTAT 281915 ||| || || || | | | || ||||||||||||| |||||||| | | ||| | Sbjct 1036403 TACTTTGGGCATTCTCG-TCATACCTCCAACTAATATAATTTCATTTATTTCATCTTTTT 1036345 Query 281916 CCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAACAAGTCTG 281975 | |||| || || | ||||||| ||||||| | | | || || || Sbjct 1036344 TAATATTTGCGTCTTTTATACATTTTTCACATGGTTCAATAGTTCCCTTTAATAAATCGT 1036285 Query 281976 AACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATT---CCT--TC 282030 || | |||||| ||||||||||| || | | | | ||| || ||| | Sbjct 1036284 GGCATAATTCTTCTAATTTAGCTCTTGTTAATTTTATTTGTAAATGCTTTGGTCCTGTTT 1036225 Query 282031 GAACAA-AG-AATCAACT-----TCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTT 282083 || | || ||| || | ||| ||||| || | |||||| | || Sbjct 1036224 GATTAGCAGTAATAAAAGGTAAATTAATTTCTGTTTGTGTTTTACTTGATAGTTCGATTT 1036165 Query 282084 TAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTT-TTGCTGATTGATTCAAATCT 282142 | ||| |||| |||| |||| |||| | || ||| || | | | || |||||| Sbjct 1036164 TTGCAGTTTCAGCTGCTTCTCTTAATCTTTGCAAAGCTAATTTATCACTTTTT-AAATCT 1036106 Query 282143 GTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCT 282202 | || | |||| | || || || | || | | || || | | | |||||||||| Sbjct 1036105 ATATTTTCTTTTTTTTTAAATTCATTAATAAAATATTCTAATATTCTTTGATCAAAATCT 1036046 Query 282203 TCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGA 282262 || ||||| || |||||||| || ||| |||| | |||| || || | Sbjct 1036045 TCTCCTCCTAAAGAGGTATTTCCATTTGTGGCTTTTACCTCAAAAACACCTCCTAATATT 1035986 Query 282263 GACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCT 282322 |||| | ||||||| || || || || | ||| ||| | || | || Sbjct 1035985 TCTAAAATTGAAACATCAAATGTACCTCCTCCTAAGTCATAAACAGCTA------TGACT 1035932 Query 282323 TTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATT 282382 || | | |||| || | |||| | || |||||||| ||||||||||||||||||||| Sbjct 1035931 TTACCATCACTTTTTTCTAAACCAAAAGCTAAAGCAGCTGCAGTTGGTTCATTAATAATT 1035872 Query 282383 CTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCG 282442 || ||||||| ||||| |||||| | || |||||||| || ||||| ||||||||||| Sbjct 1035871 CTTAAAACATCTAGACCTGCAATTTTACCAGCATCTTTTGTTGCTTGCCTTTGTGAATCA 1035812 Query 282443 TTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTT 282502 |||||||||||||| ||||||||||| || | ||||| | |||| | ||| Sbjct 1035811 TTAAAATATGCAGGCACAGTAATAACTGCTTGATGTACTTTTCTTCCTAAGTAATTTTCA 1035752 Query 282503 GCTGTTTGTTTCATTTTACTTAAAA 282527 || |||| ||||||||| ||||| Sbjct 1035751 GCAGTTTCTTTCATTTTTTCTAAAA 1035727 Score = 158 bits (174), Expect = 9e-33 Identities = 163/217 (75%), Gaps = 21/217 (10%) Strand=Plus/Minus Query 86038 GAAACATCTAATGTCCCAGCTCCTAAGTCATAAACA---ATTACGTTACCACCAGttttt 86094 |||||||| ||||| || ||||||||||||||||| || || |||||| || ||||| Sbjct 1035976 GAAACATCAAATGTACCTCCTCCTAAGTCATAAACAGCTATGACTTTACCATCACTTTTT 1035917 Query 86095 ttATTCCATTTTTCACTTCCTAAACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATT 86154 | ||||||| | || | ||| |||||||||||||||||||| Sbjct 1035916 T------------------CTAAACCAAAAGCTAAAGCAGCTGCAGTTGGTTCATTAATA 1035875 Query 86155 ATTTTAAGAACATCTAAACCCGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCG 86214 ||| | | |||||||| ||| ||||||||| ||| ||| |||||||| || |||| Sbjct 1035874 ATTCTTAAAACATCTAGACCTGCAATTTTACCAGCATCTTTTGTTGCTTGCCTTTGTGAA 1035815 Query 86215 TCATTAAAATATGCTGGTACAGTAATAACTGCTTTAT 86251 |||||||||||||| || |||||||||||||||| || Sbjct 1035814 TCATTAAAATATGCAGGCACAGTAATAACTGCTTGAT 1035778 >seq2 Length=2392314 Score = 102 bits (112), Expect = 6e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 637126 GTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCAACT 637185 || |||| |||||| ||||||||||| |||||||||||| |||| |||||||||||||| Sbjct 1174181 GTTGATTTTTCTTCACCAAATATTGCAAAAGAAATGCATGTTGGCCATTTAAGATCAACC 1174240 Query 637186 ATTATTGGTGAATCTATTTGTAGGGTATTAGAAATGTGTGGACACGATGTTTATCGTATT 637245 || | || || |||||| | ||||| ||| | | | | || | | Sbjct 1174241 ATATTAGGAGATACTATTTCCAAAGTATTTGAATTTTTAAAAGTAAAAACACATAGAGTC 1174300 Query 637246 AATCATGTGGGTGATTGGGGAACTCAATTCGGTATG 637281 |||||||| |||||||||||||| ||||| |||||| Sbjct 1174301 AATCATGTTGGTGATTGGGGAACACAATTTGGTATG 1174336 >seq4 Length=1653377 Score = 98.7 bits (108), Expect = 7e-15 Identities = 211/313 (67%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 435006 TGTAGAAGGAAAAAGAATTCAAATCAGATTCAATGGTAGAACACTTCCAATGTTCCCTAA 435065 ||| ||||| |||||||||| | | |||| ||| |||| || | ||| || ||| Sbjct 308275 TGTGGAAGGGAAAAGAATTCCATTTGGATTTAATCATAGATCATTACCACATTTTATTAA 308216 Query 435066 ATTTGATGATAGTGCATTCTCCAGAGGTTTT-TGTCGTAATTCCTTTATCGAGGGTCTTG 435124 ||||||| || | | ||||| ||| ||||| ||||| | | | || || Sbjct 308215 ATTTGATTATGGGCCCGAAAGTAGAGGATTTGTGTCG-AATTCTTATTTAAGTGGGCTAA 308157 Query 435125 GACCTTTTGAATTTTTCTTCCAAGTAATGGCTGGTCGTGAAGGTATTATTAATACAGCTA 435184 ||| ||| | || || || | |||| ||| | |||||||||||| |||| ||| Sbjct 308156 CACCACAAGAAGTCTTTTTTCATGCTATGGGAGGTAGAGAAGGTATTATTGATACTGCTT 308097 Query 435185 TTAAAACTGCTGATACTGGTTATATTCAAAGAAAACTTGTCAAGATGCTTGAAGATATTA 435244 |||||| | || ||||||||||| ||||||| | | | || | || ||| ||| Sbjct 308096 GTAAAACATCAGAAACTGGTTATATACAAAGAAGATTAATTAAAGCTATGGAGGATGTTA 308037 Query 435245 AACAAGAATATGATGGTACAGTGAGAAATGCAAATGGTAAACTTATATCATGTGTTTATG 435304 | | |||||| | |||||||||||| || ||||| | |||| || | | |||| Sbjct 308036 TGGTACAGTATGATAGAACAGTGAGAAATTCATATGGTGATATTATTCAATTTTTATATG 307977 Query 435305 GTGATAATGGTAT 435317 |||| |||| || Sbjct 307976 GTGAAGATGGAAT 307964 >seq3 Length=1704331 Score = 89.7 bits (98), Expect = 4e-12 Identities = 88/111 (79%), Gaps = 2/111 (2%) Strand=Plus/Plus Query 917174 ATTCGTTATAATGATGAGGAAATTTCAAATCGATTCCACCAAAATGAATATC-AATACTA 917232 |||| |||| |||||| |||||| | ||||| | || ||| ||||||||| |||||| Sbjct 526350 ATTCATTATCATGATGTGGAAATCTTAAATCTACACCTCCACTATGAATATCTAATACT- 526408 Query 917233 TTTCCTAATGTTTTCTTGATCATGGCTGAGCATTCAATATGCCAACCAGGT 917283 ||||||||| |||| | ||| | ||| ||||||||||||||||| ||| Sbjct 526409 TTTCCTAATATTTTACTAGCCATAGTTGAACATTCAATATGCCAACCGGGT 526459 >seq10 Length=766960 Score = 87.8 bits (96), Expect = 1e-11 Identities = 129/183 (70%), Gaps = 0/183 (0%) Strand=Plus/Minus Query 392055 GGTTTAGAAGTACGTGTACCATTTCTTGATTTTAATTATGTCGATTTTATTATGAATATT 392114 ||| |||||| | | ||||||||| | ||||| | | | | ||||| ||||||||| Sbjct 497624 GGTATAGAAGCAAGAGTACCATTTTTAGATTTAGAATTTTTAGATTTAGCTATGAATATA 497565 Query 392115 GATCCCAATTTATTGATGTATAAATCTGATTATATTGAAAAGAAAATTATTAGAGATGCT 392174 ||||| || | |||| | | || | |||||||| | ||| | ||| ||| Sbjct 497564 GATCCAAAAGAAAAAATGTGCTCAAATAATAAAATTGAAAAAGATATTTTAAGAAGAGCT 497505 Query 392175 TTCAAAGGCTATTTGCCCGAAAATATTCTTTACAGACCAAAAGAAGCTTTTTCTGATGCT 392234 || || ||||| || || |||||||||||||||| ||||||| ||||| |||| | Sbjct 497504 TTTGCTGGATATTTACCTGATAATATTCTTTACAGACAAAAAGAACAATTTTCGGATGGT 497445 Query 392235 GTT 392237 ||| Sbjct 497444 GTT 497442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740627994307074