Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq8 95.1 2e-14 >seq8 Length=956651 Score = 95.1 bits (104), Expect = 2e-14 Identities = 99/132 (75%), Gaps = 11/132 (8%) Strand=Plus/Minus Query 81651 ATTCCTTCTGTATATTATAATCAGATAGAGTTCTACAGTCTTCTAA-----------CAA 81699 |||| || ||||||||||||||||||| ||||| | |||||||| ||| Sbjct 415477 ATTCTTTTTGTATATTATAATCAGATAATGTTCTTCCATCTTCTAATTGTTTTCCAGCAA 415418 Query 81700 AGATTAGTCTTTGTTGACCTGGAAGTATTTCTTCCTTATCTTGAATCTTTGCTTTTATAT 81759 | |||| |||||| ||| | || | || |||| ||||||||||| |||||||| | || Sbjct 415417 AAATTAATCTTTGCTGATCAGGTGGGATACCTTCTTTATCTTGAATTTTTGCTTTAACAT 415358 Query 81760 TTTCAATCGTAT 81771 ||||||| |||| Sbjct 415357 TTTCAATAGTAT 415346 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903410646660640