Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq11 89.7 3e-13 >seq11 Length=733468 Score = 89.7 bits (98), Expect = 3e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 20000 TTACCACCTTGCCATACACTATTTCAATTCTTTGTGAAAGATGGTAAATTATCTTGCCAG 20059 ||||| ||||| |||| ||| |||||| | ||| ||||| |||||||| || Sbjct 126178 TTACCTCCTTGTCATATTTTATGTCAATTTTATGTTTTTGATGGAAAATTATCATGTATT 126119 Query 20060 TTGTATCAACGAAGTGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTTATGCT 20119 ||||||||||| | ||| ||| ||||||||||||||||||||||| || ||| || Sbjct 126118 ATGTATCAACGATCTTGTGATTTAGGTCTTGGTGTTCCATTTAATATTGCTTCCTATTCT 126059 Query 20120 TTACTTACA 20128 || ||||| Sbjct 126058 ATATTTACA 126050 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 319011009490499