Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq2 98.7 1e-15 >seq2 Length=2392314 Score = 98.7 bits (108), Expect = 1e-15 Identities = 210/314 (67%), Gaps = 0/314 (0%) Strand=Plus/Plus Query 160968 TAATCTCTGGTATAACTGGGCAGGATGGATCCTATCTTGCTGAACTTCTACTGAAGAAGG 161027 |||| | |||||| || || || ||||| || ||| | |||| | || | | || | Sbjct 1532231 TAATATTTGGTATCACAGGACAAGATGGGTCATATTTGAGTGAATTACTTTTAGATAAAG 1532290 Query 161028 GGTATGAAGTCCATGGTATTATTCGTAGAACCTCCTCGTTTAATACAGGAAGAATCGATC 161087 | |||||||| |||||| | ||| | || | ||||||||| |||||| |||| Sbjct 1532291 GATATGAAGTTCATGGTGTGATTAGGAGGTGTAGTACATTTAATACAAAAAGAATAGATC 1532350 Query 161088 ATATCTTCGATCAGTTACACCTCCACTACGGGGATTTGACTGACTCCCTGAACATAGTCT 161147 |||| || || | ||| | | || || || ||||| ||| || ||| | | Sbjct 1532351 ATATATTTGAAAAATTAAATTTACATTATGGTGATTTACTTGATAATAGTAATATATTTT 1532410 Query 161148 CTATCATTAAGGAAGTAGAACCTGATGAGATCTACAACCTAGGGGCACAGAGTCATGTGA 161207 || | || || || |||| |||| || || || ||| ||||| |||||||| | Sbjct 1532411 CTTTAATATCTAAAATAAAACCAAATGAAATATATAATTTAGCTGCACAAAGTCATGTAA 1532470 Query 161208 AAGTATCTTTCGAGGAACCTGAATATACAGCACAGACTGATGCTCTGGGAACCCTAAGAG 161267 |||| |||||| |||||||||||||||||| | ||| | || || ||||| Sbjct 1532471 AAGTGAGTTTCGAATTACCTGAATATACAGCACAATGTACAGCTATTGGTACATTAAGAA 1532530 Query 161268 TATTGGAGGCAGTT 161281 |||| || ||| || Sbjct 1532531 TATTAGAAGCAATT 1532544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729929152918120