Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_028955.1 Length=197361 Score E Sequences producing significant alignments: (Bits) Value seq1 89.7 6e-13 >seq1 Length=2470179 Score = 89.7 bits (98), Expect = 6e-13 Identities = 137/193 (71%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 136368 AAACTGGCAACATCAGGAAAGGGAATACTTGCTGTTGATGAATCTACAAATACTTGTGGG 136427 ||||| | | || ||||||||||||| | || | |||||||| ||| | || | | Sbjct 399850 AAACTTGTAGCACCAGGAAAGGGAATTTTAGCCGCAGATGAATCAACACAAACAATTAAG 399791 Query 136428 AAAAGATTGGCTAGTATTGGAGTAGAAAATACAGAGGCAAATAGA-CAGGCATACAGAGG 136486 |||||||| | || ||| | | || ||||| | | ||||||| | || || |||| Sbjct 399790 AAAAGATTCGATAATATAAAAATCGATAATACCGTTGAAAATAGAGCTAGC-TATAGAGA 399732 Query 136487 TATGTTATTTACCACAGAGGGATTAGGTAATTATATTAGTGGTGCTATCTTATTTGAAGA 136546 | |||||||| || | |||||||| || | |||| || || || ||||||||||| Sbjct 399731 TTTGTTATTTGGAACTAAAGGATTAGGAAAATTTATTTCAGGAGCAATTTTATTTGAAGA 399672 Query 136547 AACACTATTTCAA 136559 ||| |||| ||| Sbjct 399671 AACTTTATTCCAA 399659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 631426813250840