Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vinckei_20vinckei_20[genbank_20GCA_5F000709005.1_202014 -06-17] 49 sequences; 18,221,643 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq8 98.7 2e-15 >seq8 Length=956651 Score = 98.7 bits (108), Expect = 2e-15 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 210918 GTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTGCTTGCCT 210977 || || |||||||| || |||||||| | | || ||||||||||| | || || || Sbjct 415481 GTTGATTCTTTTTGTATATTATAATCAGATAATGTTCTTCCATCTTCTAATTGTTTTCCA 415422 Query 210978 GCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTTTTGTTTC 211037 || || || | | ||| || ||||| || | ||||| || || || || ||| ||| Sbjct 415421 GCAAAAATTAATCTTTGCTGATCAGGTGGGATACCTTCTTTATCTTGAATTTTTGCTTTA 415362 Query 211038 ACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGTGAGAGTC 211097 || ||||| || || ||||| ||| || || |||||||| || ||||| || | || Sbjct 415361 ACATTTTCAATAGTATCAGATGGTTCGACATCAAGAGTGATTGTTTTTCCTGTTAATGTT 415302 Query 211098 TTTACAAACACCTGCAT 211114 ||||| || | ||||| Sbjct 415301 TTTACGAAAATTTGCAT 415285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151272269885