Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq13 107 1e-18 >seq13 Length=2073822 Score = 107 bits (118), Expect = 1e-18 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 34160 AATCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCG 34219 || || || | ||| | || || | |||||||||| ||| |||||||||||||||||| Sbjct 510041 AAACCACCTCTCAGACGTAGTACTAAGTGTAAAGTAGATTCCTTCTGTATGTTGTAGTCG 509982 Query 34220 GACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACG 34279 || || | |||| ||||| || ||||| || || ||||| | |||||| ||| | Sbjct 509981 GATAGGGTTCTTCCGTCTTCCAATTGTTTGCCGGCAAATATGAGTCTCTGCTGATCGGGG 509922 Query 34280 GGCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTC 34338 || | | ||| || || ||| ||| ||||| | || | |||| |||| || || Sbjct 509921 GGAATTCCCTCTTTATCCTGTAT-TTTGGCTTTCACATTTTCAATCGTGTCGGATGACTC 509863 Query 34339 GACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | |||||||| || || || || || |||||||| || ||||| Sbjct 509862 CACATCAAGGGTGATGGTCTTTCCCGTAAGCGTCTTCACAAAAATTTGCAT 509812 Score = 82.4 bits (90), Expect = 5e-11 Identities = 129/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||||| || ||| ||||| |||||||| ||||| || | | || Sbjct 509111 AGGACCAAGTGTAGGGTGGATTCCTTCTGGATGTTGTAATCGGAGAGAGTTCTTCCATCT 509052 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 ||||| || || || || |||||||| | |||||||||| ||| | | ||| ||||| Sbjct 509051 TCCAATTGTTTTCCCGCAAAAATGAGTCTCTGCTGGTCGGGGGGAATTCCCTCTTTGTCC 508992 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||| || ||||| || | || | || | || |||||||||| ||||||||| Sbjct 508991 TGTATTTTCGACTTTACATTCTCAATTGTGTCCGATGACTCGACGTCCAAGGTGATGGTT 508932 Query 34358 TTGCC 34362 || || Sbjct 508931 TTTCC 508927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323070527397440