Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq5 138 9e-28 >seq5 Length=1427117 Score = 138 bits (152), Expect = 9e-28 Identities = 166/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 20221 GATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATG 20280 || ||||| || | ||||| || || |||||||| || || |||||||| | ||| Sbjct 1017183 GACTTGGGGCCCATTTATGGCTTCCAGTGGAGACACTTCGGTGCTGAATACACAAATATG 1017242 Query 20281 AACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT-TAA 20339 | ||||| | |||| ||||| |||||| ||||||||||| ||||||| || Sbjct 1017243 CATGACAATTACGAAGATAAAGGTGTAGACCAATTAAAAAATGTTATTCATTTAATAAAA 1017302 Query 20340 AACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTT 20399 || ||||| | | | || ||||||||||| || || ||||| | |||||| || | Sbjct 1017303 AATGAACCAACAAG-TAGGAGAATTATTTTGTGTGCATGGAATGTAAAAGATTTGGATCA 1017361 Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTT 20442 ||||||||| ||||| |||||||| ||||||||||||||||| Sbjct 1017362 AATGGCTTTACCTCCTTGTCATATTTTATGCCAATTTTACGTT 1017404 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399182180469430