Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 3e-13 >seq13 Length=2073822 Score = 89.7 bits (98), Expect = 3e-13 Identities = 159/231 (69%), Gaps = 6/231 (3%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| |||| ||| ||||| ||||| || | || || || || || || |||||||| || Sbjct 509355 ACCACCTCGTAAACGCAAGACCAAGTGTAGGGTGGATTCCTTCTGGATGTTGTAATCCGA 509296 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 | | | | ||| |||||||| || || |||||| | | |||||||| | ||| Sbjct 509295 GAGAGTTCTTCCGTCTTCCAATTGTTTGCCGGCAAATATAAGTCTCTGCTGGTCGGGGGG 509236 Query 33262 TATGCCTTCTTTTTCGCTAATC---GCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTG 33318 || || ||||| || || |||| | || ||| |||||||||| | | Sbjct 509235 AATTCCCTCTTTGTCCTGTATTTTGGCCT---TCACATTTTCAATCGTGTCGGATGACTC 509179 Query 33319 AACGTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || || || || || || ||||||||||| || || || ||||||||||| Sbjct 509178 CACATCAAGGGTGATGGTCTTTCCCGTAAGCGTCTTCACAAAAATTTGCAT 509128 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318776146971852