Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq13 170 4e-37 seq11 93.3 1e-13 >seq13 Length=2073822 Score = 170 bits (188), Expect = 4e-37 Identities = 174/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 104333 CCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGAT 104392 || ||||| || | ||||||| ||||| |||||||| ||||| || || ||||| ||| Sbjct 510038 CCACCTCTCAGACGTAGTACTAAGTGTAAAGTAGATTCCTTCTGTATGTTGTAGTCGGAT 509979 Query 104393 AGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGT 104452 || ||||| |||||||| | |||||| || ||||| || || ||||| ||||| || || Sbjct 509978 AGGGTTCTTCCGTCTTCCAATTGTTTGCCGGCAAATATGAGTCTCTGCTGATCGGGGGGA 509919 Query 104453 ATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACC 104512 ||||| ||||||||||| || || ||||| |||||||| | || ||| | || || Sbjct 509918 ATTCCCTCTTTATCCTGTATTTTGGCTTTCACATTTTCAATCGTGTCGGATGACTCCACA 509859 Query 104513 TCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559 || || || || ||||| || ||||| || || ||||| || ||||| Sbjct 509858 TCAAGGGTGATGGTCTTTCCCGTAAGCGTCTTCACAAAAATTTGCAT 509812 >seq11 Length=2126511 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 104363 GTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCA 104422 || || || ||||| || || ||||||| | | || | || || | || ||||| Sbjct 229955 GTGGACTCCTTCTGGATGTTGTAGTCAGCCACAAACCTGACATCCTCCAACTGCTTTCCT 229896 Query 104423 GCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTT 104482 | | | ||||||||||| || ||||| || |||||||| ||||| | ||| |||| ||| Sbjct 229895 GAATATATTAGCCTCTGCTGGTCAGGTGGGATTCCTTCCTTATCTTCAATTTTTGATTTA 229836 Query 104483 ACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTT 104542 || || | || ||| | || || || || || || || || || || | |||| Sbjct 229835 ACGTTCCTAATCGTTTCGGATGCCTCCACATCCAGGGTGATGGTTTTTCCGGTTAATGTT 229776 Query 104543 TTTACAAATATCTGCATTTTG 104563 ||||| ||||| ||||||||| Sbjct 229775 TTTACGAATATTTGCATTTTG 229755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151392882642792