Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq9 125 1e-24 >seq9 Length=2135711 Score = 125 bits (138), Expect = 1e-24 Identities = 175/243 (72%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| |||||||| ||||| ||| | ||| |||| | | ||||| | Sbjct 276354 GAGATAACATTCAAGGTATCACCAAACCAGCCATCAGACGTTTGGCCAGAAGAGGTGGTG 276295 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | |||||| |||| || ||| | |||||||| || | | || || ||| ||||||| Sbjct 276294 TGAAGCGTATCTCCGGTTTGATATATGAAGAAATCAGAGGAGTGTTAAAGGTCTTCCTAG 276235 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | ||| || | ||| | || || || || ||||| || | ||||||||||| Sbjct 276234 AAAACGTAATTAAAGATTCCATCATGTACACTGAACACGCAAAGAGAAAGACTGTCACTG 276175 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATT-TATGGTTTTGGAAGT 16696 | ||||| || || || | ||||| | ||||| | || ||| ||||||||||| || Sbjct 276174 CTATGGACATTGTGTACTCGCTGAAAAGACAAGGAAG-AACATTATATGGTTTTGGTGGT 276116 Query 16697 TAA 16699 ||| Sbjct 276115 TAA 276113 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074858049182