Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq14 84.2 4e-11 >seq14 Length=3127952 Score = 84.2 bits (92), Expect = 4e-11 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 193946 TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGAT 194005 ||| ||||| || ||||| ||| ||||| ||||| || || || |||||| | || || Sbjct 1141973 TGGCATTCTTTTTAATCATGAAAGCCCAAGGAGAGGAGAAACGTTCGTAACTAGGAAAAT 1141914 Query 194006 TACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTA-TCTT-GGTAAT 194063 ||| ||| || | || |||| || || || | || | | ||| | || || || Sbjct 1141913 TACCAGAGGGGTAGCCAACATCT--GTAAGAATAGACAAAACTGCTTAGTATTAGGGGAT 1141856 Query 194064 CTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATG 194123 || | | | | |||||||| || ||||||||||| ||| ||| |||| ||||| Sbjct 1141855 CTATCTACCTACCGAGATTGGGGGCATGCAAAGGATTACGTTCGAGCTATGTATCTAATG 1141796 Query 194124 TTGCAACAGGATGAACCCGATGATTATGTGAT 194155 ||||||||||||| || || || | ||| || Sbjct 1141795 CTGCAACAGGATGAGCCGGACGACTTTGTCAT 1141764 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807551424679440