Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq13 86.0 1e-11 >seq13 Length=2073822 Score = 86.0 bits (94), Expect = 1e-11 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 243565 ATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTC 243624 ||||| |||||||| ||| ||| |||||||| |||||||| || ||| | ||| | Sbjct 1904759 ATTGGAATGAACTCAAGACTGATGTCTCAGTACATAGAATTCGTGGCGGACAG-ATTGTT 1904817 Query 243625 ATCGCG-CTTGGTTATGAGAAAGTGTACAACTCCAAGAACCCCTTTGCCTTTATGGAGCT 243683 | | | || || | | ||| | | | || | ||||||||||| || ||||| || Sbjct 1904818 AGAGTGTCTGGGGTCTCCCAAAATATTCCACGCGAAGAACCCCTTCAACTGGATGGACCT 1904877 Query 243684 CATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGTGTCAGTGATTATCA 243737 |||||| || || || ||||| ||||| ||||| ||||| ||| || ||||| Sbjct 1904878 CATTTCTCTGCAGGGCAAAACCAACTTTTTCGAGAAGCGGGTCGCCGACTATCA 1904931 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102874715136900