Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq13 82.4 7e-11 >seq13 Length=2073822 Score = 82.4 bits (90), Expect = 7e-11 Identities = 121/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 47412 GGAATGAACGCGGAGA-TGATGAGAAAGTACATCGAATTTGTCGCCGACCGCCTGCTCGT 47470 ||||||||| | ||| ||||| ||||||| ||||| || || ||| | || | | Sbjct 1904762 GGAATGAACTCA-AGACTGATGTCTCAGTACATAGAATTCGTGGCGGACAGATTGTTAGA 1904820 Query 47471 TCAGCTAAAGTATCCCAAGATTTACCACACCGAGAATCCATTCGAGTTTATGAACAACAT 47530 || || |||||| || | |||| | |||| || ||| | | ||| || ||| Sbjct 1904821 GTGTCTGGGGTCTCCCAAAATATTCCACGCGAAGAACCCCTTCAACTGGATGGACCTCAT 1904880 Query 47531 TTCGCTCGAGGGCAAGACCAACTTTTTCGAGAAGCGCGTCGGCGAATAT 47579 ||| || ||||||| |||||||||||||||||||| |||| ||| ||| Sbjct 1904881 TTCTCTGCAGGGCAAAACCAACTTTTTCGAGAAGCGGGTCGCCGACTAT 1904929 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475498577033760