Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq13 89.7 6e-13 >seq13 Length=2073822 Score = 89.7 bits (98), Expect = 6e-13 Identities = 174/257 (68%), Gaps = 0/257 (0%) Strand=Plus/Minus Query 37440 TCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCAATAGCT 37499 ||| |||| ||| | ||||| | || || || | || || || ||||| || | ||| Sbjct 1904382 TCTTTTATGTAATTGTCAATCAACAAGCTGTATGTCTCCGAATGGATATTCTCTACAGCA 1904323 Query 37500 ATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAACCTCTTA 37559 || || || | ||||| | | || || | || || || | | ||||| | | Sbjct 1904322 ATTTGGAAGGCGTAAAATTTCTTTGCCTCGGTTATTTTCACTTGGCGTAAAAATTTGCTC 1904263 Query 37560 GCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAGAACATATTTTATA 37619 |||| ||||| ||| || |||||||| ||||||||||| || | || | |||||| Sbjct 1904262 GCTAGATTTTCCAAAACAATTCCATCACTGGCTGCAAAGAAGGCCAACACGTGTTTTATG 1904203 Query 37620 AAATGTCTTTCATCATTTGATAATTTTTTCCAATCATTAATATCTTTTGATAAATCAACT 37679 |||||| |||||| || |||||||| |||| || | ||| | || || |||| | Sbjct 1904202 AAATGTTTTTCATTATCATTTAATTTTTCGAAATCTTTTAAATCGCTGGACAAGTCAATT 1904143 Query 37680 TCATCAACGGTCCAAAA 37696 || || | ||||| || Sbjct 1904142 TCCTCGGCCGTCCAGAA 1904126 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592314030918960