Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq13 161 8e-35 >seq13 Length=2073822 Score = 161 bits (178), Expect = 8e-35 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||||||||| || || || ||||| ||||| || || || |||||||||| | Sbjct 509810 CCACCTCTTAAACGTAGGACCAAGTGTAGGGTGGATTCCTTCTGGATGTTGTAATCGGAG 509751 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| |||||||| || || ||||| || | | ||| ||||| || ||| Sbjct 509750 AGAGTTCTTCCATCTTCCAATTGTTTTCCCGCAAAAATGAGTCTCTGCTGATCAGGGGGA 509691 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||| || || || |||||||| ||| ||| |||| | ||| || || | ||| || Sbjct 509690 ATGCCCTCCTTGTCCTGAATTTTGGCTTTCACATTTTCGATAGTATCGGATGATTCTACA 509631 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 |||||||||| || || || |||| || || ||||| || ||||| Sbjct 509630 TCAAGAGTGATGGTCTTTCCTGTTAGCGTCTTCACAAAAATTTGCAT 509584 Score = 122 bits (134), Expect = 7e-23 Identities = 147/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || ||||||||||||| || || || ||||| ||||| || || || |||||||||| | Sbjct 509126 CCACCTCTTAAACGTAGGACCAAGTGTAGGGTGGATTCCTTCTGGATGTTGTAATCGGAG 509067 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||||| |||| |||||||| || || ||||| || | | ||| || ||||| ||| Sbjct 509066 AGAGTTCTTCCATCTTCCAATTGTTTTCCCGCAAAAATGAGTCTCTGCTGGTCGGGGGGA 509007 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || || ||||| || || ||||| |||||| | || | ||||| || | || || Sbjct 509006 ATTCCCTCTTTGTCCTGTATTTTCGACTTTACATTCTCAATTGTGTCCGATGACTCGACG 508947 Query 101423 TCAAGAGTGACCGTTTTGCC 101442 || | |||| ||||| || Sbjct 508946 TCCAAGGTGATGGTTTTTCC 508927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396276593713518