Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq13 158 6e-34 >seq13 Length=2073822 Score = 158 bits (174), Expect = 6e-34 Identities = 183/244 (75%), Gaps = 2/244 (1%) Strand=Plus/Minus Query 25915 ATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCT 25974 ||||| || ||| ||| |||||||| || || | ||| | || || || | ||| || Sbjct 559581 ATTTTCCTTTACTCTCTTCATAAATAGGTCAGGTACCCATACGGCGTAGAACAGATCCCT 559522 Query 25975 CGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGA 26034 |||||| | ||||| ||||||||||| || || ||||| || || ||||| ||||| Sbjct 559521 CGCTCTTAGCTCTTCCTTTCCGTGATTTTTGCGAAGGTCTAAAAATTCGAAAATGTCTGA 559462 Query 26035 GTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTAC 26094 |||||| ||||| | || | || || ||||||||| ||||| || ||||| ||||| Sbjct 559461 GTGCCACGGTTCGATGTACACTGCGAAGGAACCTTTTCTCTTTCCCCCCCCTTGGTCTAC 559402 Query 26095 GTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAAT-CCGT 26153 || || ||||| ||||| ||||| ||| |||||| ||||| || |||| |||| |||| Sbjct 559401 ATACCTAGCAGTGTCATTAAAAACCCTCAGCATTGGGACTAA-CCCGTTGGAAATGCCGT 559343 Query 26154 TTGT 26157 | || Sbjct 559342 TAGT 559339 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253038846612050