Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq13 197 4e-45 >seq13 Length=2073822 Score = 197 bits (218), Expect = 4e-45 Identities = 593/909 (65%), Gaps = 15/909 (2%) Strand=Plus/Minus Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 || |||| || || ||||| ||||| || || |||||||| ||||| ||||| || Sbjct 559850 TACTCTATGATTTCGCAGCAGAGGTTGCTACATTTTATGGTGCCCAAATTTTTCTGATTC 559791 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 |||||| ||||| | || ||||| || ||||| || || || || ||||| Sbjct 559790 GATTTAGCATTACAGGAGTCTTTGTACAGCATGTAGGGAACACCCGTTTCTATCTGACTC 559731 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAA---TTTGCTTGTTG-TATCTGCCTTC 155806 | |||||| | ||| ||||| | ||| | ||| |||| ||| | | ||| Sbjct 559730 TGCAGAATGGCAAACCATAGGTCCTGCGCAAGGACGGTTTTCTTGCCCATATTTTC-TTC 559672 Query 155807 CGACTCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGG 155866 | |||||||| |||| | | || | | ||||| || | | || |||| || || Sbjct 559671 C---TCATATTTGGTATATAACTTTTCGAATTCCTCTCCCCATGATTCGCTCAACCCTGG 559615 Query 155867 GCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATAC 155926 || | || ||||| | || | |||| ||||||| | |||| | || |||||||| Sbjct 559614 ACATTCATTCGGGCACATCAAAGTCCAATTTTTATTTTCCTTTACTCTCTTCATAAATAG 559555 Query 155927 ATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATT 155986 ||| |||| | || ||||| || ||||| || || ||| || | |||||||| Sbjct 559554 GTCAGGTACCCATACGGCGTAGAACAGATCCCTCGCTCTTAGCTCTTCCTTTCCGTGATT 559495 Query 155987 CTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAA 156046 || || || ||||| ||||| ||| || | || || || | |||| || || Sbjct 559494 TTTGCGAAGGTCTAAAAATTCGAAAATGTCTGAGTGCCACGGTTCGATGTACACTGCGAA 559435 Query 156047 ACTACCATTCCTCTTGCCACCC---TGATCTACATACCGAGCAGTCTTATTGAAGACACC 156103 ||| || ||||| || ||| || |||||||||| |||||| | ||| || || | Sbjct 559434 GGAACCTTTTCTCTTTCCCCCCCCTTGGTCTACATACCTAGCAGTGTCATTAAAAACCCT 559375 Query 156104 TAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGA 156163 ||||| || | | || |||||| |||| || || || | || | |||| Sbjct 559374 CAGCATTGGGACTAACCCGTTGGAAATGCCGTTAGTCCCTCTGATGTACGAATTTTGCCC 559315 Query 156164 GCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTC 156223 | || || || | | |||||| ||||| | | ||| ||| || || | Sbjct 559314 CCTAATATCCTGCACGGCCACTCCAATCCCACCAGCCGTTTTGCTAATCAACGCACACTG 559255 Query 156224 CTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGA 156283 ||||| ||| | || || |||||||| || || || ||| | || ||| | || || Sbjct 559254 CTTTAGAGTCTCAAATATGCCTTCAATTGAGTCCGATTTCATGCAGAGGAGAAAACAGGA 559195 Query 156284 ACTTAATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATA 156343 | | || || | ||||| || | ||||| | ||||||||||| || | ||||| Sbjct 559194 AGACATCTGTGGCCTGGGTGTCCCCGAATTGAACAACGTAGGTGTTGCGTGGGTGAAATA 559135 Query 156344 CTTATTAGACATATAATCGTATGTCTCCTTAAT--CTTCTCAAGATTAGACCCGTGAATA 156401 ||| | |||||| || ||| ||||| || | |||||| |||| ||| || Sbjct 559134 CTTTTGAGACATCAGATGGTACGTCTC--TAGTGCCTTCTCTAGATCTCCTATGTGGATC 559077 Query 156402 CAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCGC 156461 | ||||| || |||||| || ||| || || | ||| | ||| |||| |||||| Sbjct 559076 CCAATAGATACTCTCATCAGCAAATGTTGCGGTCTCTCAATGATCTTCCCATTAATTCGA 559017 Query 156462 AGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTG 156521 || ||||| | | ||||| || |||||||| || || || | |||||| | || Sbjct 559016 AGGAGGTAGGACCTTTCCAATGTCTTAAACCCAAAGTAGTCGTAATTAAAATCTCTTGTG 558957 Query 156522 TAATCAATC 156530 || |||||| Sbjct 558956 TAGTCAATC 558948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471810547234038