Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq5 104 3e-17 >seq5 Length=1427117 Score = 104 bits (114), Expect = 3e-17 Identities = 186/272 (68%), Gaps = 0/272 (0%) Strand=Plus/Minus Query 146875 TTGAGCTTGGGGAAGGGTCGGGGGTTCCTGGCCAGCTGAATTTTCAGGGGCTCCACGTGG 146934 || ||| | ||||| || |||| ||||| |||||| | ||||| | || || ||| Sbjct 1017634 TTAAGCGTTGGGAACGGGTAGGGGATCCTGTTCAGCTGCACTTTCAAGCTGTCAACATGG 1017575 Query 146935 TTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTC 146994 ||| |||||||||||||| |||| |||| | || | | |||| | | | Sbjct 1017574 TTGTTGTAGACGTGCGCGTTGCCCAAAATGTGTATGAACTGTGCAGGCTGCAAATTGCAC 1017515 Query 146995 ACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGG 147054 || || || | ||||| |||| | || || || ||||||||||||||||| || Sbjct 1017514 ACCTGCGCAATCATGTGTGTGAATATGGAATACGAAGCGATGTTGAAGGGGACCCCAAGA 1017455 Query 147055 CCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCCCCGTCGGCCACGTAAAAC 147114 |||| ||| | ||||||||||||| ||| || || | ||| ||| |||||||| Sbjct 1017454 CCCAAGTCACAAGACCTCTGGTACATAATGCATGATAGTTTCCCATCGAAAACGTAAAAT 1017395 Query 147115 TGGCACAGGATGTGGCACGGCGGCAGCGCCAT 147146 ||||| | || || || || || | ||||| Sbjct 1017394 TGGCATAAAATATGACAAGGAGGTAAAGCCAT 1017363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583485272193600