Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq13 84.2 2e-11 >seq13 Length=2073822 Score = 84.2 bits (92), Expect = 2e-11 Identities = 206/310 (66%), Gaps = 2/310 (1%) Strand=Plus/Minus Query 4811 GTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTATAGC 4870 ||||| || ||| |||| || | | ||| || | || ||||| ||||| |||| ||| Sbjct 1904383 GTCTTTTATGTAATTGTCAATCAACAAGCTGTATGTCTCCGAATGGATATTCTCTACAGC 1904324 Query 4871 AATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTC 4930 ||| || || ||||||| | || || |||| || |||| | ||||| || | Sbjct 1904323 AATTTGGAAGGCGTAAAATTTCTTTGCCTCGGTTATTTTCACTTGGCGTAAAAAT-TTGC 1904265 Query 4931 TA-CTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATA 4989 | ||| ||||| || || || |||||||||||||| || ||||| || || || Sbjct 1904264 TCGCTAGATTTTCCAAAACAATTCCATCACTGGCTGCAAAGAAGGCCAACACGTGTTTTA 1904205 Query 4990 TAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAA 5049 | || | | ||| | | || | ||||| | | ||||| | | || |||| Sbjct 1904204 TGAAATGTTTTTCATTATCATTTAATTTTTCGAAATCTTTTAAATCGCTGGACAAGTCAA 1904145 Query 5050 CTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGAT 5109 ||| || | ||||| || ||||| ||||| |||||||| | | ||||| || || | Sbjct 1904144 TTTCCTCGGCCGTCCAGAAGGACGCCTCCGCCTTTTTGTAAAAATCCCAAACGTCTGGGT 1904085 Query 5110 ACTGAATCGG 5119 || ||| || Sbjct 1904084 ACAAAATGGG 1904075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427047653454542