Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[genbank_20GCA_5F900093545.1_202016-11-18] 374 sequences; 28,995,317 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq13 104 5e-17 >seq13 Length=2073822 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| | || || || || || || |||||||||||||||| | |||||| |||||| Sbjct 509795 AGGACCAAGTGTAGGGTGGATTCCTTCTGGATGTTGTAATCGGAGAGAGTTCTTCCATCT 509736 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || | ||| || || || || || |||||||| || | | || || ||||| || Sbjct 509735 TCCAATTGTTTTCCCGCAAAAATGAGTCTCTGCTGATCAGGGGGAATGCCCTCCTTGTCC 509676 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 |||||||| ||| ||| | || | | || || ||||| |||||||| || || Sbjct 509675 TGAATTTTGGCTTTCACATTTTCGATAGTATCGGATGATTCTACATCAAGAGTGATGGTC 509616 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || |||||||| || | ||||| Sbjct 509615 TTTCCTGTTAGCGTCTTCACAAAAATTTGCAT 509584 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || || || |||||||||||||| | | |||||| || ||||| | Sbjct 509334 CAAG-TGTAGGGTGGATTCCTTCTGGATGTTGTAATCCGAGAGAGTTCTTCCGTCTTCCA 509276 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| ||||| || ||||| ||||||||||| | | ||||| || || || || | Sbjct 509275 ATTGTTTGCCGGCAAATATAAGTCTCTGCTGGTCGGGGGGAATTCCCTCTTTGTCCTGTA 509216 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| || ||| | || | |||| || ||| || ||||| || || || || | Sbjct 509215 TTTTGGCCTTCACATTTTCAATCGTGTCGGATGACTCCACATCAAGGGTGATGGTCTTTC 509156 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| || |||||||| || | ||||| Sbjct 509155 CCGTAAGCGTCTTCACAAAAATTTGCAT 509128 Score = 93.3 bits (102), Expect = 1e-13 Identities = 146/208 (70%), Gaps = 1/208 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || || || || |||||||||||||| | | |||||| || ||||| | Sbjct 509562 CAAG-TGTAGGGTGGATTCCTTCTGGATGTTGTAATCCGAGAGAGTTCTTCCGTCTTCCA 509504 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 ||| || || || || || |||||||| || | | || || ||||| || |||| Sbjct 509503 ATTGTTTTCCCGCAAAAATGAGTCTCTGCTGATCAGGGGGAATGCCCTCCTTGTCCTGAA 509444 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 |||| ||| ||| | || | | || || ||||| |||||||| || || || | Sbjct 509443 TTTTGGCTTTCACATTTTCGATAGTATCGGATGATTCTACATCAAGAGTGATGGTCTTTC 509384 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || |||||||| || | ||||| Sbjct 509383 CTGTTAGCGTCTTCACAAAAATTTGCAT 509356 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153815271034954