Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq5 104 2e-17 >seq5 Length=1370936 Score = 104 bits (114), Expect = 2e-17 Identities = 289/438 (66%), Gaps = 4/438 (1%) Strand=Plus/Minus Query 101637 TAAGTGTTGGAAACGGTCTAGGAGTTCGCGT-CAACTGCATTTTAAGAGCA-TCAATGTG 101694 |||| ||||| ||||| |||| | || || || ||||| ||| | ||| |||| || Sbjct 966360 TAAGCGTTGGGAACGGG-TAGGGGATCCTGTTCAGCTGCACTTTCA-AGCTGTCAACATG 966303 Query 101695 ATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGT 101754 | |||| ||| || | || | | | || || |||| | ||||| | ||| Sbjct 966302 GTTGTTGTAGACGTGCGCGTTGCCCAAAATGTGTATGAACTGTGCAGGCTGCAAATTGCA 966243 Query 101755 GACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAA 101814 || || ||||||||| || || | ||||| ||| ||||| || || || || | Sbjct 966242 CACCTGCGCAATCATGTGTGTGAATATGGAATACGAAGCGATGTTGAAGGGGACCCCAAG 966183 Query 101815 CCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAA 101874 |||| ||| || || || |||| || || || || ||||| | || ||||| Sbjct 966182 ACCCAAGTCACAAGACCTCTGGTACATAATGCATGATAGTTTCCCATCGAAAACGTAAAA 966123 Query 101875 TTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGC 101934 ||| | ||| | ||||||||| || || |||||| | | ||| |||||||| || Sbjct 966122 TTGGCATAAAATATGACAAGGAGGTAAAGCCATTTGATCCAAATCTTTTACATTCCATGC 966063 Query 101935 ACACATTAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAA 101994 ||||| | || || ||| ||| || | ||||||| || ||| | | |||||| Sbjct 966062 ACACAAAATAATTCTCCTACTTGTTGGTTCATTTTTTATTAAATGAATAACATTTTTTAA 966003 Query 101995 TTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCTTTATATTCTGCTCCGAAATG 102054 |||||| || |||| ||| |||| | | | | | ||||| || ||||| || Sbjct 966002 TTGGTCTACACCTTTATCTTCGTAATTGTCATGCATATTTGTGTATTCAGCACCGAAGTG 965943 Query 102055 CCTCCACTGAAATCCATA 102072 |||||||| || ||||| Sbjct 965942 TCTCCACTGGAAGCCATA 965925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361239101245748