Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_002166.1 Length=40751 Score E Sequences producing significant alignments: (Bits) Value seq1895 369 1e-97 >seq1895 Length=1240 Score = 369 bits (408), Expect = 1e-97 Identities = 218/227 (96%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 27431 GCGCTGAGGTCTGCCTCGTGAAGAAGGTGTTGCTGACTCATACCAGGCCTGAATAGCTTC 27490 |||||||||||||||||||||||||||||||||||||||||||||||||||||| || | Sbjct 1223 GCGCTGAGGTCTGCCTCGTGAAGAAGGTGTTGCTGACTCATACCAGGCCTGAATCGCCCC 1164 Query 27491 ATCATCCAGCCAGAAAGTTATGGAGCCACGGTTGATGAGGGCTTTATTGTAGGTGGGCCA 27550 |||||||||||||||||| | |||||||||||||||||| ||||| |||||||||| ||| Sbjct 1163 ATCATCCAGCCAGAAAGTGAGGGAGCCACGGTTGATGAGAGCTTTGTTGTAGGTGGACCA 1104 Query 27551 GTTGGTGATTTTGAACTTTTGCTTTGCCACGGAACGGTCTGCGTTGTCGGGAAGATACGT 27610 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1103 GTTGGTGATTTTGAACTTTTGCTTTGCCACGGAACGGTCTGCGTTGTCGGGAAGATGCGT 1044 Query 27611 GATCTGATCCTTCAACTCAGCAAAAGTTCGATTTATTCAACAAAGCC 27657 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1043 GATCTGATCCTTCAACTCAGCAAAAGTTCGATTTATTCAACAAAGCC 997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130277348585688