Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq5 138 9e-28 >seq5 Length=1370936 Score = 138 bits (152), Expect = 9e-28 Identities = 166/223 (74%), Gaps = 2/223 (1%) Strand=Plus/Plus Query 20221 GATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGACATG 20280 || ||||| || | ||||| || || |||||||| || || |||||||| | ||| Sbjct 965910 GACTTGGGGCCCATTTATGGCTTCCAGTGGAGACACTTCGGTGCTGAATACACAAATATG 965969 Query 20281 AACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAAT-TAA 20339 | ||||| | |||| ||||| |||||| ||||||||||| ||||||| || Sbjct 965970 CATGACAATTACGAAGATAAAGGTGTAGACCAATTAAAAAATGTTATTCATTTAATAAAA 966029 Query 20340 AACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAGATGTGCCTTT 20399 || ||||| | | | || ||||||||||| || || ||||| | |||||| || | Sbjct 966030 AATGAACCAACAAG-TAGGAGAATTATTTTGTGTGCATGGAATGTAAAAGATTTGGATCA 966088 Query 20400 AATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTT 20442 ||||||||| ||||| |||||||| ||||||||||||||||| Sbjct 966089 AATGGCTTTACCTCCTTGTCATATTTTATGCCAATTTTACGTT 966131 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399170630828860