Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq13 96.9 3e-15 >seq13 Length=2031768 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 ||||| || | ||||| ||||| | || | | |||| |||||||||||||||||||| Sbjct 490533 TCCTTCTGTATGTTGTAGTCGGATAGGGTTCTTCCGTCTTCCAATTGTTTGCCGGCAAAT 490474 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTG-ATCAACTCTTTGACTCT 43037 || | || ||| ||||||| || | || ||||| || ||| || |||| || | Sbjct 490473 ATGAGTCTCTGCTGATCGGGGGGAATTCCCTCTTTATC-CTGTATTTTGGCTTTCACATT 490415 Query 43038 GCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCAC 43097 ||| |||||| | ||| || || | || || || ||||| || || || ||||| Sbjct 490414 TTCAATCGTGTCGGATGACTCCACATCAAGGGTGATGGTCTTTCCCGTAAGCGTCTTCAC 490355 Query 43098 AAAAATTTGCAT 43109 |||||||||||| Sbjct 490354 AAAAATTTGCAT 490343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381356827455384