Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq9 116 6e-22 >seq9 Length=1923364 Score = 116 bits (128), Expect = 6e-22 Identities = 173/243 (71%), Gaps = 2/243 (1%) Strand=Plus/Minus Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517 |||||||||| ||||| |||||||| ||||| ||| | ||| |||| | | ||||| | Sbjct 110489 GAGATAACATTCAAGGTATCACCAAACCAGCCATCAGACGTTTGGCCAGAAGAGGTGGTG 110430 Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577 | |||||| |||| || ||| | || ||||| || | | || || || ||||||| Sbjct 110429 TGAAGCGTATCTCCGGTTTGATATACGAAGAAATCAGAGGAGTGTTAAAAGTCTTCCTAG 110370 Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637 | | ||| || | ||| | || || || || ||||| || | ||||||||||| Sbjct 110369 AAAACGTAATTAAAGATTCCATCATGTACACTGAACACGCAAAGAGAAAGACTGTCACTG 110310 Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATT-TATGGTTTTGGAAGT 16696 | ||||| || || || | ||||| | ||||| | || ||| ||||||||||| || Sbjct 110309 CTATGGACATTGTGTACTCGCTGAAAAGACAAGGAAG-AACATTATATGGTTTTGGTGGT 110251 Query 16697 TAA 16699 ||| Sbjct 110250 TAA 110248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79072687484364