Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmodium_20vivax_20[refseq_20GCF_5F000002415.2_202009-05-06] 2,748 sequences; 27,013,691 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq14 84.2 4e-11 >seq14 Length=3120417 Score = 84.2 bits (92), Expect = 4e-11 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 193946 TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGAT 194005 ||| ||||| || ||||| ||| ||||| ||||| || || || |||||| | || || Sbjct 1117802 TGGCATTCTTTTTAATCATGAAAGCCCAAGGAGAGGAGAAACGTTCGTAACTAGGAAAAT 1117743 Query 194006 TACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTTA-TCTT-GGTAAT 194063 ||| ||| || | || |||| || || || | || | | ||| | || || || Sbjct 1117742 TACCAGAGGGGTAGCCAACATCT--GTAAGAATAGACAAAACTGCTTAGTATTAGGGGAT 1117685 Query 194064 CTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGATGTGGTTAATG 194123 || | | | | |||||||| || ||||||||||| ||| ||| |||| ||||| Sbjct 1117684 CTATCTACCTACCGAGATTGGGGGCATGCAAAGGATTACGTTCGAGCTATGTATCTAATG 1117625 Query 194124 TTGCAACAGGATGAACCCGATGATTATGTGAT 194155 ||||||||||||| || || || | ||| || Sbjct 1117624 CTGCAACAGGATGAGCCGGACGACTTTGTCAT 1117593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807527460478880